GCGGCCGCTAAACGACTCCTATTTCGAGAGGATCCGCGGAATTCCCTAAT
GTGCCTTAAATCAGGCCTGCAAGATCACTTGGTTGTCTCTCTATTCTGGT
CATGGGAGACCCAAGCATGCTGGTTTTCTGCAGAATAAAAGATTCTTTGT
GTTTACATGCTACTTGAGTCCAGAGTATCATTCTTTGGAGAATCAAAAAC
CCTAACAGTGGGAAGCCCAGTCCTTCACCATAACCCTCAGAGTCTGGAGA
ACTGGCTTCGTTCCCTTCTCTGGTGCATCCTGGCATTATTACTTGCTGCC
TGGAGTGTGTGTCCGCTGGCTCTTTGCACAGCTGCTCCTTCTCTTTCTAT
TCTACTCTCAACTCTAGCACTGGTTTTTTTAGGTGACCTGCAGCAGCCAG
ATAGCTCCAAGTGTTCCTTCTGAGGGTAAGCATTCCACATGCTCTCTGTC
CTGTCCCCTCCAGCACTTGCCATAAGATAAGCTGCCCTACAGTACTTTTT
CTGTCTCTCTGACTTGAGCAGAATCATCTGTGGGGCAAGCCTACTCTCCA
GCACTGGAGAACTATGCCTGGCGTGTGCAGAAAGCTGCAAGACACACAGC
TTTTCTATCACATCCAGAGGATCTCATAGTGAATGTTTGTCACGTTCAAA
CTCACCCTATCTGTGTATCATCGCAGCTTAGCCAACACACCGAAACCCAC

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXTCTGGTTTTGGTGCTTGAGAGCACTTGCGGTTTGGCACTATGAG
AGACCAGGAGGAGCCATTGGTGAAGGTGCAGCCTCAGTTGCAGTAGATGC
CTCAGGATTGAGGGATCATAGAGAGAAGCTGAGGCTCTGCACTATGTGGT
AAGACCAGAGTCCCTAAAGAGAGCCCAGCAAAGGCTATGGTGACAGCACA
GCCCAGTTCAGTAAAGGCCCCAGCAGACTGAAGATATGGGATGGTAATCA
AGGACAGCAGGAAGTGGGGAGTGTAGCTAGCCTGAGCCATGGAGGCTTGC
TATGTCTCGCTGCCGAGGGAAGAGCCAGAGAAGGGAGCTGCGAAAGCCCT
TTGCAGCCCAGAGCCTCAGATGGCTGACCCTGAACTTTACACAGTTGGAC
TTTGGTTTTGCTCTGACTGTGTTCTGGTTCCTCTCTCCTGGAGTAAGAAA
ATACTTAATTTTGATTTTATAGGAACCTGCAGTTGAAACACGTTAGACTT
TTAAAGAGAACTTGAACTTTATAAGTATAGAAAAATTTACATACCATGAA
AGCTTTTTTAATCACACCATGTTTTATATTGGGATTTTAATGTGAAATCT
TGGGCATGATCTATGACAGGAAGCCTTGGTTTGATTAGCGACGCGTT

Query= MSMg01no095_k04.b1 MSMg01no095_k04.b1 CHROMAT_FILE:
MSMg01no095_k04.b1 PHD_FILE: MSMg01no095_k04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:43 2005
         (589 letters)



>mm_chr11_32880346_32881334
          Length = 989

 Score =  886 bits (458), Expect = 0.0
 Identities = 563/622 (90%), Gaps = 38/622 (6%)
 Strand = Plus / Minus

                                                                       
Query: 6   ggaattccctaatgtgccttaaatcaggcctgcaagatcacttggttgtctctctattct 65
           ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 719 ggaattccctaatgtgctttaaatcaggcctgcaagaccacttggttgtctctctattct 660

                                                                       
Query: 66  ggtcatgggagacccaagcatgctggttttctgcagaataaaagattctttgtgtttaca 125
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 ggtcatgggagacccaagcatgctggttttctgcagaataaaagattctttgtgtttaca 600

                                                                       
Query: 126 tgctacttgagtccagagtatcattctttggagaatcaaaaaccctaacagtgggaagcc 185
           | ||| |||| |||||||||||||||||||| |||||||| ||||||||| |||||| ||
Sbjct: 599 tactaattgaatccagagtatcattctttggcgaatcaaagaccctaacaatgggaaacc 540

                                                                       
Query: 186 cagtccttcaccataaccctcagagtctggagaactggcttcgttcccttctctggtgca 245
           |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct: 539 cagtccttcaccataaccctcagagtctggtgaactggctccgttcccttctctggtgca 480

                                                                       
Query: 246 tcctggcattattacttgctgcctggagtgtgtgtccgctggctctttgcacagctgctc 305
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 479 tcctggcattattacttgctgcctggagtgtgtgtccgctggttctttgcacagctgctc 420

                                                                       
Query: 306 cttctctttctattctactctcaactctagcactg------------------------- 340
           |||||||||||||||||||||||||||||||||||                         
Sbjct: 419 cttctctttctattctactctcaactctagcactgttttttttttttgtttgtttgtttt 360

                                                                       
Query: 341 ---------gttttttt----aggtgacctgcagcagccagatagctccaagtgttcctt 387
                    ||||||||    |||||||||||||||||||| |||| |||||||||||||
Sbjct: 359 gtttgttttgtttttttttttaggtgacctgcagcagccaggtagccccaagtgttcctt 300

                                                                       
Query: 388 ctgagggtaagcattccacatgctctctgtcctgtcccctccagcacttgccataagata 447
           ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 299 ctgagggtaagcatttcacatgctctctgtcttgtcccctccagcacttgccataagata 240

                                                                       
Query: 448 agctgccctacagtactttttctgtctctctgacttgagcagaatcatctgtggggcaag 507
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 239 agctgccctacagtactttttctgtctctctgacttcagcagaatcatctgtggggcaag 180

                                                                       
Query: 508 cctactctccagcactggagaactatgcctggcgtgtgcagaaagctgcaagacacacag 567
           ||||||||||||||||||||||||| |||||| |||| ||||||||||| ||||||||||
Sbjct: 179 cctactctccagcactggagaactaggcctggtgtgttcagaaagctgccagacacacag 120

                                 
Query: 568 cttttctatcacatccagagga 589
           ||||||||||||||||||||||
Sbjct: 119 cttttctatcacatccagagga 98


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 589
Length of database: 989
Length adjustment: 10
Effective length of query: 579
Effective length of database: 979
Effective search space:   566841
Effective search space used:   566841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)