Query= MSMg01no096_k03.b1 MSMg01no096_k03.b1 CHROMAT_FILE:
MSMg01no096_k03.b1 PHD_FILE: MSMg01no096_k03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:53:03 2005
(246 letters)
>mm_chr11_46554261_46554906
Length = 646
Score = 460 bits (238), Expect = e-134
Identities = 244/246 (99%)
Strand = Plus / Plus
Query: 1 tttagaggcaagcttgagaacatatttttaaacgtgtgtatttatgtcacgcagaacagg 60
|||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct: 201 tttagaggcaagcttgagaacatatttttaaatgtgtgtatttatgtcaagcagaacagg 260
Query: 61 tgcagccctcctccagaaagcagcctcatcctcttcggccattgcatgtctgatcggtac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgcagccctcctccagaaagcagcctcatcctcttcggccattgcatgtctgatcggtac 320
Query: 121 ttcacatactttggcatgtgctttcatgccccaaagaatcctcccccaagcctctccccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttcacatactttggcatgtgctttcatgccccaaagaatcctcccccaagcctctccccc 380
Query: 181 acctacactgtaagtttttaaaatgagccacgagtcagacagtgtaggaaatacatcata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acctacactgtaagtttttaaaatgagccacgagtcagacagtgtaggaaatacatcata 440
Query: 241 gtgaac 246
||||||
Sbjct: 441 gtgaac 446
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 646
Length adjustment: 9
Effective length of query: 237
Effective length of database: 637
Effective search space: 150969
Effective search space used: 150969
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no096_k03.g1 MSMg01no096_k03.g1 CHROMAT_FILE:
MSMg01no096_k03.g1 PHD_FILE: MSMg01no096_k03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:53:03 2005
(228 letters)
>mm_chr11_46664463_46665089
Length = 627
Score = 373 bits (193), Expect = e-108
Identities = 199/201 (99%), Gaps = 1/201 (0%)
Strand = Plus / Minus
Query: 1 ttagctccctgagaaaggacccattctcaaaacacccccaatgtttccatatcacaagtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 ttagctccctgagaaaggacccattctcaaaacacccccaatgtttccatatcacaagtt 339
Query: 61 ttatgaaaagatatgcacagaatttctgaacttctatttctttcttttattgtgccttgg 120
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 ttatgaaaagatatacacagaatttctgaacttctatttctttcttttattgtgccttgg 279
Query: 121 ggacatcacaaatgttccaaccatttgcagtcataaagtaaagaataaagattagattta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 ggacatcacaaatgttccaaccatttgcagtcataaagtaaagaataaagattagattta 219
Query: 181 tttaaaaagaaagaaagaaag 201
|||||||| ||||||||||||
Sbjct: 218 tttaaaaa-aaagaaagaaag 199
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 228
Length of database: 627
Length adjustment: 9
Effective length of query: 219
Effective length of database: 618
Effective search space: 135342
Effective search space used: 135342
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
