Query= MSMg01no099_b13.b1 MSMg01no099_b13.b1 CHROMAT_FILE:
MSMg01no099_b13.b1 PHD_FILE: MSMg01no099_b13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:56:25 2005
(297 letters)
>mm_chr11_79625243_79625939
Length = 697
Score = 532 bits (275), Expect = e-155
Identities = 290/297 (97%), Gaps = 4/297 (1%)
Strand = Plus / Minus
Query: 1 atataacaaacctcagatggtactgagcactgtgtacaggtgactctttcccctgtaccc 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 320 atataacaaacctcagatggtactgagcactgtgtacaggtgactctttcccttgtaccc 261
Query: 61 acacttccagactgaatgccattcccatctcacccatgtacttgccttgtgctctgagac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 acacttccagactgaatgccattcccatctcacccatgtacttgccttgtgctctgagac 201
Query: 121 agatctcagcgacaccagctgacatttctttctttccttacagagatgagaacggtcaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 agatctcagcgacaccagctgacatttctttctttccttacagagatgagaacggtcaca 141
Query: 181 ttttcactcacaggaagcatgccagttttctttggcagacatactctctctgcacattgt 240
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 140 ttttcactcacaggaagcatgccagttttctttgg----catactctctctgcacattgt 85
Query: 241 tatcctggccagcatcaccacttttatgctttgccgctgtgattaagtaaaatacgg 297
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 84 tatcctggccagcatcaccacttttatgctttggggctgtgattaagtaaaatacgg 28
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 297
Length of database: 697
Length adjustment: 9
Effective length of query: 288
Effective length of database: 688
Effective search space: 198144
Effective search space used: 198144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no099_b13.g1 MSMg01no099_b13.g1 CHROMAT_FILE:
MSMg01no099_b13.g1 PHD_FILE: MSMg01no099_b13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:56:25 2005
(177 letters)
>mm_chr11_79489517_79490093
Length = 577
Score = 335 bits (173), Expect = 1e-96
Identities = 176/177 (99%)
Strand = Plus / Plus
Query: 1 agccctttccaacttcttacagaggaaagggtgaccgtgggaccttctgacgggggaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agccctttccaacttcttacagaggaaagggtgaccgtgggaccttctgacgggggaaca 260
Query: 61 cagctcttacagaggctgaagaggggctgcctgggcagcctgtgtgccttctggcaacca 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagctcttagagaggctgaagaggggctgcctgggcagcctgtgtgccttctggcaacca 320
Query: 121 cttccagttagagccggctttgttcatccctagatgagaagactaagtggaaacatg 177
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttccagttagagccggctttgttcatccctagatgagaagactaagtggaaacatg 377
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 177
Length of database: 577
Length adjustment: 8
Effective length of query: 169
Effective length of database: 569
Effective search space: 96161
Effective search space used: 96161
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
