Query= MSMg01no102_a15.b1 MSMg01no102_a15.b1 CHROMAT_FILE:
MSMg01no102_a15.b1 PHD_FILE: MSMg01no102_a15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:00:29 2005
(222 letters)
>mm_chr11_84295161_84295782
Length = 622
Score = 414 bits (214), Expect = e-120
Identities = 220/222 (99%)
Strand = Plus / Plus
Query: 1 aatcatctggtaagaatttttccactgcaataaatatgcaaatgaggagagccacccagt 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 201 aatcatctggtaagaatttttccactgcaataaatatgcaaatgaggagagccagtcagt 260
Query: 61 cgtatttcaggcccgacttgctagtgttttaaaaaagacacaaatttattaattgccggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cgtatttcaggcccgacttgctagtgttttaaaaaagacacaaatttattaattgccggt 320
Query: 121 ggccagaggaatcctattactttgggcattgattacaaagctgtgtgagtgattattgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggccagaggaatcctattactttgggcattgattacaaagctgtgtgagtgattattgtg 380
Query: 181 caactcgcaggctacccaggcatgaggaaaaattattaaagc 222
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caactcgcaggctacccaggcatgaggaaaaattattaaagc 422
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 222
Length of database: 622
Length adjustment: 9
Effective length of query: 213
Effective length of database: 613
Effective search space: 130569
Effective search space used: 130569
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no102_a15.g1 MSMg01no102_a15.g1 CHROMAT_FILE:
MSMg01no102_a15.g1 PHD_FILE: MSMg01no102_a15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:00:30 2005
(244 letters)
>mm_chr11_84437654_84438297
Length = 644
Score = 416 bits (215), Expect = e-121
Identities = 235/243 (96%), Gaps = 4/243 (1%)
Strand = Plus / Minus
Query: 1 aatgctaatttgagcacctagtagggatttggatatactcagtggtgcagcatttgccta 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 581 aatgctaatttgagcacctagtagggatttggatatactcagtggtggagcatttgccta 522
Query: 61 gcatataggagaccctaggttctaaccccaataacacacacacacacatacacacacaca 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 521 gcatataggagaccctaggttctaaccccaataacacacacacacac--acacatacaca 464
Query: 121 cacacacacacatacacacacagagtggatatgttttgctacgttgcaagagacttccct 180
||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 463 cacacacacac--acacagacagagtgaatatgttttgctacgttgcaagagacttccct 406
Query: 181 tttcttctttcaagtgccccaatgaccttaggcccctctcctccctcctctatgcacctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 tttcttctttcaagtgccccaatgaccttaggcccctctcctccctcctctatgcacctc 346
Query: 241 ctg 243
|||
Sbjct: 345 ctg 343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
