Query= MSMg01no102_n05.b1 MSMg01no102_n05.b1 CHROMAT_FILE:
MSMg01no102_n05.b1 PHD_FILE: MSMg01no102_n05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:01:32 2005
(443 letters)
>mm_chr11_26689928_26690770
Length = 843
Score = 822 bits (425), Expect = 0.0
Identities = 437/441 (99%), Gaps = 2/441 (0%)
Strand = Plus / Minus
Query: 5 gaattcaataatgt-tccaaatattttgatc-accaaacgttagaattgtcataatttca 62
|||||||||||||| | |||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 752 gaattcaataatgtatgcaaatattttgatcaaccaaacgttagaattgtcataatttca 693
Query: 63 atttgcggttgtttccttttgattatataaaaaatactaatttatatttcatcatgtaaa 122
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 atttgtggttgtttccttttgattatataaaaaatactaatttatatttcatcatgtaaa 633
Query: 123 agcaaactccaaactcaaatttttcagctcactgaatggaattttgaaattaaaattaaa 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 agcaaactccaaactcaaatttttcagctcactgaatggaattttgaaattaaaattaaa 573
Query: 183 tggtttataaaacccctgtctcttatgacagcagaagtgagtgaaggcacttttgaactc 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 tggtttataaaacccctgtctcttatgacagcagaagtgagtgaaggcacttttgaactc 513
Query: 243 aattgttaatgtaatgatagaacagattaaagctgtacttgataaacataatattttggt 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 aattgttaatgtaatgatagaacagattaaagctgtacttgataaacataatattttggt 453
Query: 303 aaagattaagtgatgtttttggaatacaagtcaactcaagtagaaccaaatctcagataa 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 aaagattaagtgatgtttttggaatacaagtcaactcaagtagaaccaaatctcagataa 393
Query: 363 taataataaagcaaaattgactatagacaaagctcactttcaatattgttattctataca 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 taataataaagcaaaattgactatagacaaagctcactttcaatattgttattctataca 333
Query: 423 tcctgattattttttcagacc 443
|||||||||||||||||||||
Sbjct: 332 tcctgattattttttcagacc 312
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 443
Length of database: 843
Length adjustment: 10
Effective length of query: 433
Effective length of database: 833
Effective search space: 360689
Effective search space used: 360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no102_n05.g1 MSMg01no102_n05.g1 CHROMAT_FILE:
MSMg01no102_n05.g1 PHD_FILE: MSMg01no102_n05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:01:32 2005
(452 letters)
>mm_chr11_26553299_26554150
Length = 852
Score = 851 bits (440), Expect = 0.0
Identities = 449/452 (99%)
Strand = Plus / Plus
Query: 1 aattcattcagcagaccaggctggatgcacattcagagatatgcctgcctctgcatctta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aattcattcagcagaccaggctggatgcacattcagagatatgcctgcctctgcatctta 260
Query: 61 agttctgggattaatgaaatgtatcaccaccacttagctaagcttgcatttatttattta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agttctgggattaatgaaatgtatcaccaccacttagctaagcttgcatttatttattta 320
Query: 121 tttatttatttatttatttatttaatgcagaactttagaattgaagagaagttgtggaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttatttatttatttatttatttaatgcagaactttagaattgaagagaagttgtggaaa 380
Query: 181 cacaaccaatcaaggctttcaattctgtctaggcagtgttgctaaaggtttgcccttggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cacaaccaatcaaggctttcaattctgtctaggcagtgttgctaaaggtttgcccttggc 440
Query: 241 attctggtcatggaaaggtgtgaacatggaggaaaggtgcaattcagaactttccatgtc 300
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 attctggtcaaggaaaggtgtgaacatggaggaaaggtgcaattcagaactttccatgtc 500
Query: 301 ttctttgacattgccaaaataaatatccttggctgttaaacatgaaatcaaatgattgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttctttgacattgccaaaataaatatccttggctgttaaacatgaaatcaaatgattgat 560
Query: 361 ctaaaaacaatgttcttgaccactgaggtcttgtgtagccagccaaggttctttggctga 420
||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 561 ctaaaaacaatgtacttgaccactgaggtcttgtgtagccagccaaggctctttggctga 620
Query: 421 agcagtttctcagtaagatatctctaaatctg 452
||||||||||||||||||||||||||||||||
Sbjct: 621 agcagtttctcagtaagatatctctaaatctg 652
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 452
Length of database: 852
Length adjustment: 10
Effective length of query: 442
Effective length of database: 842
Effective search space: 372164
Effective search space used: 372164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
