Query= MSMg01no104_o08.b1 MSMg01no104_o08.b1 CHROMAT_FILE:
MSMg01no104_o08.b1 PHD_FILE: MSMg01no104_o08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:04:19 2005
(472 letters)
>mm_chr11_26261801_26262672
Length = 872
Score = 880 bits (455), Expect = 0.0
Identities = 464/467 (99%), Gaps = 1/467 (0%)
Strand = Plus / Minus
Query: 5 gaattctgcttaccggcttgtttcctctgggagttctcagatacctttcttatacagttc 64
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 824 gaattctgcttacaggcttgtttcctctgggagttctcagatacctttcttatacagttc 765
Query: 65 agactcacctactcagtaccacccatagttggctagatcatgctatgtcaaatagcaatt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 agactcacctactcagtaccacccatagttggctagatcatgctatgtcaaatagcaatt 705
Query: 125 aagaaaataccacacagacatggccacaggccagtctgacctgaagagttctttagttgt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 aagaaaataccacacagacatggccacaggccagtctgacctgaagagttctttagttgt 645
Query: 185 gattcctcttccccagtgactctaggtttgtttcaaatagacaggtgaagctaacaatga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 gattcctcttccccagtgactctaggtttgtttcaaatagacaggtgaagctaacaatga 585
Query: 245 acagggagaaaagtaaggcttaaggttagggaggttgagaagaatcacatagaaagactc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 acagggagaaaagtaaggcttaaggttagggaggttgagaagaatcacatagaaagactc 525
Query: 305 tcatatggtggttagacaagaggattttgtcttaaaagcaattcaaggctattggaagag 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 tcatatggtggttagacaagaggattttgtcttaaaagcaattcaaggctattggaagag 465
Query: 365 ggttttaaagcaagtagtaaaaaatataaatagatagataatagatgatggtgatgaaga 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 ggttttaaagcaagtagtaaaaaatataaatagatagataatagatgatggtgatgaaga 405
Query: 425 tagatagatagatagatagatagatagatagatagatagatagatag 471
||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 404 tagatagatagatagatagatagatagatagat-gatagatatatag 359
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 43
Number of extensions: 8
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 6
Number of HSP's successfully gapped: 1
Length of query: 472
Length of database: 872
Length adjustment: 10
Effective length of query: 462
Effective length of database: 862
Effective search space: 398244
Effective search space used: 398244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no104_o08.g1 MSMg01no104_o08.g1 CHROMAT_FILE:
MSMg01no104_o08.g1 PHD_FILE: MSMg01no104_o08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:04:19 2005
(300 letters)
>mm_chr11_26103605_26104304
Length = 700
Score = 565 bits (292), Expect = e-165
Identities = 298/300 (99%)
Strand = Plus / Plus
Query: 1 caaacaagattagctagaataatgatcccaagaggtgtccatatccttataattcatcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caaacaagattagctagaataatgatcccaagaggtgtccatatccttataattcatcaa 260
Query: 61 caggaagctttatataccaaacttacaatatgctaatggcactttggaactctaactaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caggaagctttatataccaaacttacaatatgctaatggcactttggaactctaactaag 320
Query: 121 gtcaatgactatgaaactgagagacaatcctcacctatccaagtgtgcccaatcaaatat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtcaatgactatgaaactgagagacaatcctcacctatccaagtgtgcccaatcaaatat 380
Query: 181 tgtaaatctttaattacagtgagtccttcccggctgaacttaaggaggcaggacatggag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtaaatctttaattacagtgagtccttcccggctgaacttaaggaggcaggacatggag 440
Query: 241 gagtttttcagaaagatgcaatattgctacactggtggctctgaaggtggaggacaggta 300
|||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 441 gagtttttcagaaagatgcagtattgctatactggtggctctgaaggtggaggacaggta 500
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 300
Length of database: 700
Length adjustment: 9
Effective length of query: 291
Effective length of database: 691
Effective search space: 201081
Effective search space used: 201081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
