Query= MSMg01no106_b06.b1 MSMg01no106_b06.b1 CHROMAT_FILE:
MSMg01no106_b06.b1 PHD_FILE: MSMg01no106_b06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:06:00 2005
(604 letters)
>mm_chr11_53778034_53779037
Length = 1004
Score = 743 bits (384), Expect = 0.0
Identities = 402/408 (98%)
Strand = Plus / Minus
Query: 197 gtgcgtggcagtcagagtgccatggaagtgtccatcaggggtcaggggagggtttactga 256
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1004 gtgcgtggcagtcagagtgccatagaagtgtccatcaggggtcaggggagggtttactga 945
Query: 257 gaagcaaaccatgagctgagagttgaaagatgcgcagaaatttggtgtcaaaggggtgtt 316
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 944 gaagcaaaccatgagctgagagttgaaagatgcgtagaaatttggtgtcaaaggggtgtt 885
Query: 317 gagaagaagagcactctgggcaggaaaacccaccatctgttaaagtcttgggaatagaaa 376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 884 gagaagaagagcactctgggcaggaaaacccaccatctgttaaagtcttgggaatagaaa 825
Query: 377 aaagttcactgtggttgaggtctggaggctcaggtggagacaaggaccacgaggcaggca 436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 824 aaagttcactgtggttgaggtctggaggctcaggtggagacaaggaccacgaggcaggca 765
Query: 437 gaggcctgagcggatgggcaaatggggcttagctcagaccacagtgagacatttggattt 496
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 764 gaggcctgagcggatgggcaaatggggcttagctcagaccacagtgagaaatttggattt 705
Query: 497 gagaagagaggagccttgagagttgtcttttaaaccagagttgttttttaaaccttttaa 556
|||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 704 gagaagtgaggagccttgagagttgttttttaaaccagagttgttttttaaaccttttaa 645
Query: 557 aaagggatttgataggcttgaattgatggaaggaaaacaagaggcatc 604
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 gaagggatttgataggcttgaattgatggaaggaaaacaagaggcatc 597
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 604
Length of database: 1004
Length adjustment: 10
Effective length of query: 594
Effective length of database: 994
Effective search space: 590436
Effective search space used: 590436
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no106_b06.g1 MSMg01no106_b06.g1 CHROMAT_FILE:
MSMg01no106_b06.g1 PHD_FILE: MSMg01no106_b06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:06:00 2005
(291 letters)
>mm_chr11_53643571_53644261
Length = 691
Score = 536 bits (277), Expect = e-157
Identities = 288/295 (97%), Gaps = 6/295 (2%)
Strand = Plus / Plus
Query: 1 gcctcctgagtgctgggatcaaagccaccgcctggctcagcctttcagtttttactttat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gcctcctgagtgctgggatcaaagccaccgcctggctcagcctttcagtttttactttat 260
Query: 61 tgccttttaaatagtgtcatgatgaatactgggggacttttgtttggcttggtggttctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgccttttaaatagtgtcatgatgaatactgggggacttttgtttggcttggtggttctt 320
Query: 121 gtatttttcaacttttttgtttttgtttttgtttt------caagacagggtttctctgt 174
||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 321 gtatttttcaacttttttgtttttgtttttgtttttgttttcaagacagggtttctctgt 380
Query: 175 gtagccctggctgtcctggaactcactctgtataccaggatggcctcgaactcagaaatc 234
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 381 gtagccctggctgtcctggaactcactctgtagaccaggatggcctcgaactcagaaatc 440
Query: 235 tgcctgcctctacctcccaaatgctgggattatcaatttttgttttatttgttct 289
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgcctgcctctacctcccaaatgctgggattatcaatttttgttttatttgttct 495
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
