Query= MSMg01no108_c24.b1 MSMg01no108_c24.b1 CHROMAT_FILE:
MSMg01no108_c24.b1 PHD_FILE: MSMg01no108_c24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:10:57 2005
(656 letters)
>mm_chr11_34990239_34991294
Length = 1056
Score = 1245 bits (644), Expect = 0.0
Identities = 650/652 (99%)
Strand = Plus / Plus
Query: 5 gaattctccctccttcctagaaacaacctccgatcacaacagcatgtcccaaactgcagt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctccctccttcctagaaacaacctccgatcacaacagcatgtcccaaactgcagt 264
Query: 65 cctgtcatttcttggccccttccccactcaggattcccacatcatctttgcagttgtccc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cctgtcatttcttggccccttccccactcaggattcccacatcatctttgcagttgtccc 324
Query: 125 taatgttcagctaatgattatttactaatccattttaatctgctttctttttttaagtca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 taatgttcagctaatgattatttactaatccattttaatctgctttctttttttaagtca 384
Query: 185 gggaaacaaatgtttcattgtatcatcgactctcaaggtatgcggcatgcatggatccaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gggaaacaaatgtttcattgtatcatcgactctcaaggtatgcggcatgcatggatccaa 444
Query: 245 ttcatgcagagtgtttaagatttttaatcatctaccaggagaacttaaggttcagcaaag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttcatgcagagtgtttaagatttttaatcatctaccaggagaacttaaggttcagcaaag 504
Query: 305 atgtagcctacataggaacagctttcgtgaacatctttaggaggtttggatgagcctggc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 atgtagcctacataggaacagctttcgtgaacatctttaggaggtttggatgagcctggc 564
Query: 365 cctacatgagagaatccctgggtccagactagatgtcttagccacggtgctgtttcacag 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cctacatgagagaatccctgggtccagactagatgtcttagccacggtgctgtttcacag 624
Query: 425 tgactccacccttgaagttgagcagggaaagcctttttcagtgaagtattttggaatcct 484
||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 625 tgactccacccttgaggttgagcagggaaagcctttttcagtaaagtattttggaatcct 684
Query: 485 tggaggaggagctccaaaagaagaggtattgaatctgcatttttttttccccaaagagca 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tggaggaggagctccaaaagaagaggtattgaatctgcatttttttttccccaaagagca 744
Query: 545 gctttgccccctctgcttctgtgcatgattctgcagtgctctgggggacatttgctggta 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 gctttgccccctctgcttctgtgcatgattctgcagtgctctgggggacatttgctggta 804
Query: 605 acattcttaaaatagagacatggaagccaatctgtcaggtagaagtgtgcgg 656
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 acattcttaaaatagagacatggaagccaatctgtcaggtagaagtgtgcgg 856
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1056
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1046
Effective search space: 675716
Effective search space used: 675716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no108_c24.g1 MSMg01no108_c24.g1 CHROMAT_FILE:
MSMg01no108_c24.g1 PHD_FILE: MSMg01no108_c24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:10:57 2005
(611 letters)
>mm_chr11_35079759_35080769
Length = 1011
Score = 1106 bits (572), Expect = 0.0
Identities = 602/612 (98%), Gaps = 1/612 (0%)
Strand = Plus / Minus
Query: 1 cctaaatatggtggtggcaggtgatctgttccggccttccattctgtcgtgggctgtctg 60
||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||
Sbjct: 625 cctaaatatggtggtggcaggtggtctgtcccggccttccactctgtcgtgggctgtctg 566
Query: 61 cttacctccatttgtaataactttcatcaacagcgcgagagcaagcatctcccactccac 120
||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 565 attacctccatttgtagtaactttcatcaacagtgcgagagcaagcatctcccactccac 506
Query: 121 taatgatggtataccgaatgtcaagtttcagtagactcatgagcaatactcagtaggtcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 taatgatggtataccgaatgtcaagtttcagtagactcatgagcaatactcagtaggtcg 446
Query: 181 acttaaatgtgcaaaacggctagggtctcatccaccttgctagagccatcaaggtgcctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 acttaaatgtgcaaaacggctagggtctcatccaccttgctagagccatcaaggtgcctg 386
Query: 241 gtgacccactgaggacaactttcttccccaggcgggtgatagagatttttagtttaaccg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gtgacccactgaggacaactttcttccccaggcgggtgatagagatttttagtttaaccg 326
Query: 301 tttaaccaagctccagttaaagtcctaggattacatgaaaccagcatgagaagcctgacg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tttaaccaagctccagttaaagtcctaggattacatgaaaccagcatgagaagcctgacg 266
Query: 361 agagagcaaagaaggcaagctaactcggtctggggcctggggcttagggagaggcatggc 420
|||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||
Sbjct: 265 agagagcaaagaaggcaagctaactcggcctggggcctggggcttggggagaggcatggc 206
Query: 421 agcttttttgttttgttttttgcttttttgttgttttgttttgttttgtttactcccttt 480
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 205 agcttttttgttttgttttttgtttttttgttgttttgttttgttttgtttactcccttt 146
Query: 481 ctatatcatatcctctagaggagagctg-aaaaaaaaagcaatctgcagatgcgatagac 539
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 145 ctatatcatatcctctagaggagagctgaaaaaaaaaagcaatctgcagatgcgatagac 86
Query: 540 atgaacagaagcacgagagaagtttgtagctgctattaaaagaattgggaaagaggcacc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 atgaacagaagcacgagagaagtttgtagctgctattaaaagaattgggaaagaggcacc 26
Query: 600 ctagtaaagaaa 611
||||||||||||
Sbjct: 25 ctagtaaagaaa 14
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 611
Length of database: 1011
Length adjustment: 10
Effective length of query: 601
Effective length of database: 1001
Effective search space: 601601
Effective search space used: 601601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
