Query= MSMg01no109_f23.b1 MSMg01no109_f23.b1 CHROMAT_FILE:
MSMg01no109_f23.b1 PHD_FILE: MSMg01no109_f23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:12:34 2005
(494 letters)
>mm_chr11_88209630_88210523
Length = 894
Score = 948 bits (490), Expect = 0.0
Identities = 493/494 (99%)
Strand = Plus / Minus
Query: 1 gcacatgtctttacctactgaaccatcccctggctccccaaaataccttactttgaagat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 gcacatgtctttacctactgaaccatcccctggctccccaaaataccttactttgaagat 659
Query: 61 acttgctccttcacgaactgtctgtgagttgccggtgcccgtctctttcctgtttctctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 acttgctccttcacgaactgtctgtgagttgccggtgcccgtctctttcctgtttctctt 599
Query: 121 accatgctcatttcttctaccaaaaaaaaacccaaaaaacaaaacaaaacaaaaaaaaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 accatgctcatttcttctaccaaaaaaaaacccaaaaaacaaaacaaaacaaaaaaaaac 539
Query: 181 cctttaatgtaagcatatccgtcatgcactttgattggtttttgtctatttttaaagaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 cctttaatgtaagcatatccgtcatgcactttgattggtttttgtctatttttaaagaca 479
Query: 241 tttgtatttaccattgtttgaagagcaagaataatacctgctagatggtttcagagttac 300
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 tttgtagttaccattgtttgaagagcaagaataatacctgctagatggtttcagagttac 419
Query: 301 tcttttaggtcagcttttctgcttaatcactgaggggctctgttctgttctgttctgttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 tcttttaggtcagcttttctgcttaatcactgaggggctctgttctgttctgttctgttc 359
Query: 361 tgttctgttctgttctgttctgttctgttctgttctgttctgttctgttctgttctgttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 tgttctgttctgttctgttctgttctgttctgttctgttctgttctgttctgttctgttc 299
Query: 421 tgtcttgtctttgttgagacaagcccttgctacataatccaggctttcctcaaacgtgaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 tgtcttgtctttgttgagacaagcccttgctacataatccaggctttcctcaaacgtgaa 239
Query: 481 atcctcctgcttca 494
||||||||||||||
Sbjct: 238 atcctcctgcttca 225
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 70
Number of extensions: 23
Number of successful extensions: 23
Number of sequences better than 10.0: 1
Number of HSP's gapped: 21
Number of HSP's successfully gapped: 1
Length of query: 494
Length of database: 894
Length adjustment: 10
Effective length of query: 484
Effective length of database: 884
Effective search space: 427856
Effective search space used: 427856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no109_f23.g1 MSMg01no109_f23.g1 CHROMAT_FILE:
MSMg01no109_f23.g1 PHD_FILE: MSMg01no109_f23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:12:34 2005
(175 letters)
>mm_chr11_88092797_88093370
Length = 574
Score = 302 bits (156), Expect = 9e-87
Identities = 168/172 (97%), Gaps = 1/172 (0%)
Strand = Plus / Plus
Query: 1 ccgccctccagatcaccaggaagcagctgatgagaagggtgctcactgcacgtctctctt 60
||||||||||| |||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 201 ccgccctccagttcaccaggaagcagctgatgagaagggtgctcactgaa-gtctctctt 259
Query: 61 gcttttttctggagccctgcttctgtgttgggcttggctctggattctcactcttcttgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gcttttttctggagccctgcttctgtgttgggcttggctctggattctcactcttcttgg 319
Query: 121 cctgaaagacatctgcataggtagcctctggttccgtggccactaggtcctg 172
|||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 cctggaagacatctgcataggtagcctctggttccgtggccactaggtcctg 371
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 175
Length of database: 574
Length adjustment: 8
Effective length of query: 167
Effective length of database: 566
Effective search space: 94522
Effective search space used: 94522
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
