Query= MSMg01no111_d01.b1 MSMg01no111_d01.b1 CHROMAT_FILE:
MSMg01no111_d01.b1 PHD_FILE: MSMg01no111_d01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:15:11 2005
(596 letters)
>mm_chr11_32722216_32723211
Length = 996
Score = 1062 bits (549), Expect = 0.0
Identities = 585/597 (97%), Gaps = 1/597 (0%)
Strand = Plus / Minus
Query: 1 aagcatacattcatcccatttctggcatttctgtgtctgaatagtcacccagcagacatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 aagcatacattcatcccatttctggcatttctgtgtctgaatagtcacccagcagacatg 577
Query: 61 agaaacatacccacacaaagacaaagtacatgcatgttcaaagcactgttatccatgacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 576 agaaacatacccacacaaagacaaagtacatgcatgttcaaagcactgttatccatggcc 517
Query: 121 accttgaactgcaagccaggaggtaaggattaattgtgataggctcatgcaacatactca 180
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 accttgaacagcaagccaggaggtaaggattaattgtgataggctcatgcaacatactca 457
Query: 181 tcaataaaactgaacatacaaaagcatggagccaaaccataaacattatgcaaaagacac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 tcaataaaactgaacatacaaaagcatggagccaaaccataaacattatgcaaaagacac 397
Query: 241 cgtcgactcatttccgtgaagctcgtgaatgagcaccttctcgcagtcagtaccccagtg 300
||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 396 cgtcgactcatttccgtgaagctcgtgaatgagcaccatctcgcagtcaataccccagtg 337
Query: 301 gactgactgagaggggaatgggggacctttcaagaacatggagggg-tcagattttcatt 359
|||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||||
Sbjct: 336 gactgactgagaggggaatgggggacctttcaagaagatggagggggtcagaatttcatt 277
Query: 360 ggggtcacatgtagacacttgtcaaaacgaatcagactgtgcgtttaaaaatgtgtgcat 419
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 276 ggggtcacatgtagacacttgtcaaaactaatcagactgtgcgtttaaaaatgtgtgcat 217
Query: 420 ttatgtgaattatacctccataaagctgggacctcccacagtccacttggaataaaaaag 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 ttatgtgaattatacctccataaagctgggacctcccacagtccacttggaataaaaaag 157
Query: 480 actttaagtgattcagaaaggcagtggcaatgacattttcatcacagcagggaagaggag 539
||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 156 actttaagtgattcagaaaggcagtggcaatgaaatttttgtcacagcagggaagaggag 97
Query: 540 aagggggaagacatatatgtcggcattgtcctgtcacctgtatctgcaaaggtcgga 596
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 96 aagggggaagacatatatgttggcattgtcctgtcacctgtatctgcaaaggtcgga 40
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 596
Length of database: 996
Length adjustment: 10
Effective length of query: 586
Effective length of database: 986
Effective search space: 577796
Effective search space used: 577796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no111_d01.g1 MSMg01no111_d01.g1 CHROMAT_FILE:
MSMg01no111_d01.g1 PHD_FILE: MSMg01no111_d01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:15:11 2005
(330 letters)
>mm_chr11_32577846_32578575
Length = 730
Score = 600 bits (310), Expect = e-176
Identities = 325/334 (97%), Gaps = 8/334 (2%)
Strand = Plus / Plus
Query: 1 cccaggactgccaaaatgaaaaacaacaaaatcaccaagagagtcctaaattgaactatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cccaggactgccaaaatgaaaaacaacaaaatcaccaagagagtcctaaattgaactatt 260
Query: 61 gaggatatttgggactttatttaacttgagtaatccatgtaattaacatgtgatgtgggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaggatatttgggactttatttaacttgagtaatccatgtaattaacatgtgatgtgggt 320
Query: 121 cttttctctgaccatacagtctgatagaactactatttcaactagtatgtgtaataatgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttttctctgaccatacagtctgatagaactactatttcaactagtatgtgtaataatgt 380
Query: 181 gtgtaacggggcctccgggtagagagctcattttaatagaatcactcacatgcctatgga 240
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtgtaacggggcctctgggtagagagctcattttaatagaatcactcacatgcctatgga 440
Query: 241 ccttagatagctggtgttcaaacagatcatctgtattttga----gatagtgtgctcttc 296
||||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 441 ccttagatagctggtgttcaaacagatcatctgta----gaccgagatagtgtgctcttc 496
Query: 297 aggacttactgtgagactttaccgtgacagttgt 330
||||||||||||||||||||||||||||||||||
Sbjct: 497 aggacttactgtgagactttaccgtgacagttgt 530
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 330
Length of database: 730
Length adjustment: 9
Effective length of query: 321
Effective length of database: 721
Effective search space: 231441
Effective search space used: 231441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
