Query= MSMg01no114_p05.b1 MSMg01no114_p05.b1 CHROMAT_FILE:
MSMg01no114_p05.b1 PHD_FILE: MSMg01no114_p05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:20:46 2005
(271 letters)
>mm_chr11_44627330_44627999
Length = 670
Score = 480 bits (248), Expect = e-140
Identities = 263/268 (98%), Gaps = 1/268 (0%)
Strand = Plus / Plus
Query: 1 ggacctggaaatagcagtgtttttcatggggacagtgaggtcctctttacaagagaaggc 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 ggacctggaaatagcagtgtttttcatggggacagtgaggtcctctttaaaagagaaggc 260
Query: 61 aagacagaatctaaagatacgctagctgggtttttagaggtactgtggaatgtctcaaag 120
|||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||
Sbjct: 261 aagacagaatctaaagatacgcta-ctggatttttagaggtactgtggaatgtctcaaag 319
Query: 121 attctcaaatgcaggaattctggggttctaggctgtcctcttgacagatgacatgtctct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 attctcaaatgcaggaattctggggttctaggctgtcctcttgacagatgacatgtctct 379
Query: 181 gaaccattgggattgactgactcacatcctagctctactgatgactgtgtgtagcctctg 240
|| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gagccattgggattgactgagtcacatcctagctctactgatgactgtgtgtagcctctg 439
Query: 241 ccttttaatgttactgtgtaaagactgg 268
||||||||||||||||||||||||||||
Sbjct: 440 ccttttaatgttactgtgtaaagactgg 467
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 271
Length of database: 670
Length adjustment: 9
Effective length of query: 262
Effective length of database: 661
Effective search space: 173182
Effective search space used: 173182
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no114_p05.g1 MSMg01no114_p05.g1 CHROMAT_FILE:
MSMg01no114_p05.g1 PHD_FILE: MSMg01no114_p05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:20:46 2005
(260 letters)
>mm_chr11_44767931_44768590
Length = 660
Score = 495 bits (256), Expect = e-144
Identities = 259/260 (99%)
Strand = Plus / Minus
Query: 1 tgatatgctttcttcattaactgctcatggcccagaattgaggggaaagctgcccttcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 tgatatgctttcttcattaactgctcatggcccagaattgaggggaaagctgcccttcct 401
Query: 61 ggggagtctttaagtgaaaaactcatcttaattgaacgcacatatcagttagctatcttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 ggggagtctttaagtgaaaaactcatcttaattgaacgcacatatcagttagctatcttc 341
Query: 121 cagattcaccattaatgacccatttgcaccggagcgccttctcttctcaatggctggtac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 cagattcaccattaatgacccatttgcaccggagcgccttctcttctcaatggctggtac 281
Query: 181 aagggcaacagtctcagggtcgtgcttagaaaggaacattcagcaggaacgcagagggga 240
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 280 aagggcaacagtctcagggtcgtgcttagaaaggaagattcagcaggaacgcagagggga 221
Query: 241 caagagagggaagaagtggg 260
||||||||||||||||||||
Sbjct: 220 caagagagggaagaagtggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 260
Length of database: 660
Length adjustment: 9
Effective length of query: 251
Effective length of database: 651
Effective search space: 163401
Effective search space used: 163401
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
