NCGTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTCAACTAAGGACTACTGAGTGGCTGAAAAGTACCTGAAAAAATG
TTCAACATCCTTAATCATCAGGGAAATGCTAATCAAAAGAACTCTGAGAT
TCCACCTCACACTAGTCAGAATGGCTAAGATCAAAATTTCATGTGACAGC
AGATGCTGGCAAGGATGTGGAGAAAGAGGAACACTCCTCCAATTGCTTGT
GGGATTGCAAGCTTGTACAACCACTCTGGAAATCAATCTGGCTGTTTCTC
AGAAAATTGGACATAGTACTACCAGAGGATCCAGCAATACCTCTCCTGGG
CATATAACCAGAAGATGTTCCAACTGCTAATAAGGACACATGCTCCACTA
TGTTCATTGCAGCCTTATGTATAATAGACAGAAGCTGGTAAGAACCCAGA
TGTCCCTCAACAGAGAAATGGATACAGAAAATGTGGTACATTTACACAAT
GGAGTACTACTCAGGTATTAAAAACAATGAATTTATGAAATTCTTAGGCA
AATGGTGGGATCTGGAGGATATCATCCTGAGTGATATAGCCCAATCACAA
AAGAACACACATGATATGCACTCACTGATTAGTGGATATTAGTCCAGAAA
CTTAGAATACCCACATACAATTTGCAAAACACATGAAACACAAGAAGAAG
GAAA

TATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAGACCAGGCTATGGAGCAGATAGG
AGGTATTAGACACATAGGTCTCGTGGACCGATAGTTTGTAGTCTCCACAG
GCAGTGGGGTTATCTGACTGGTTTAAAAATACTAAGACTGTCTGGTGTTT
TCCATCTGCAGCAACTCAGATAGACAGAAGAAACAAATGGCAAAGCCTCT
GGACAGTCAGTAGAGGTTTGGTGGAGCTAGCCATGGGAGCGGGTGAGATG
GCCATTGCCAGCAACAGGCAAGGAACAATTATGCCTTATAAAATTACACA
AAACATCTGCCCATATATACAATGAAGACAAATGAAGAACAATGGGTGAA
ATGGAGAAAACCAAAATGAAAATAATATAGTAATGAAAAATAATTTCTGA
TTAATACTGATTTTAAACATCAAGTAACAAATTGGTTTATATCATCAGTG
CAAAATTTAATATTAGAGTAATTAGAAAAGTATATTTATTGAAAAAGAAT
AAACTTCACTTTTTACTTCATATTGCAATATAATATACTGAAAAGAAGTA
ATTATATATAACTGTATATTTGTGGAGAGCTTTTGGGGCCACTTGGCAGG
AATCTGACACTGGCCAAGAATAAAGAAATGAGCTTCAGGCAGGAATCTGA
CATTAGCTAGAAC

Query= MSMg01no114_p06.g1 MSMg01no114_p06.g1 CHROMAT_FILE:
MSMg01no114_p06.g1 PHD_FILE: MSMg01no114_p06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:20:46 2005
         (609 letters)



>mm_chr11_15877654_15878662
          Length = 1009

 Score = 1178 bits (609), Expect = 0.0
 Identities = 609/609 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   agaccaggctatggagcagataggaggtattagacacataggtctcgtggaccgatagtt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 agaccaggctatggagcagataggaggtattagacacataggtctcgtggaccgatagtt 685

                                                                       
Query: 61  tgtagtctccacaggcagtggggttatctgactggtttaaaaatactaagactgtctggt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tgtagtctccacaggcagtggggttatctgactggtttaaaaatactaagactgtctggt 625

                                                                       
Query: 121 gttttccatctgcagcaactcagatagacagaagaaacaaatggcaaagcctctggacag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gttttccatctgcagcaactcagatagacagaagaaacaaatggcaaagcctctggacag 565

                                                                       
Query: 181 tcagtagaggtttggtggagctagccatgggagcgggtgagatggccattgccagcaaca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tcagtagaggtttggtggagctagccatgggagcgggtgagatggccattgccagcaaca 505

                                                                       
Query: 241 ggcaaggaacaattatgccttataaaattacacaaaacatctgcccatatatacaatgaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ggcaaggaacaattatgccttataaaattacacaaaacatctgcccatatatacaatgaa 445

                                                                       
Query: 301 gacaaatgaagaacaatgggtgaaatggagaaaaccaaaatgaaaataatatagtaatga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gacaaatgaagaacaatgggtgaaatggagaaaaccaaaatgaaaataatatagtaatga 385

                                                                       
Query: 361 aaaataatttctgattaatactgattttaaacatcaagtaacaaattggtttatatcatc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aaaataatttctgattaatactgattttaaacatcaagtaacaaattggtttatatcatc 325

                                                                       
Query: 421 agtgcaaaatttaatattagagtaattagaaaagtatatttattgaaaaagaataaactt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 agtgcaaaatttaatattagagtaattagaaaagtatatttattgaaaaagaataaactt 265

                                                                       
Query: 481 cactttttacttcatattgcaatataatatactgaaaagaagtaattatatataactgta 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cactttttacttcatattgcaatataatatactgaaaagaagtaattatatataactgta 205

                                                                       
Query: 541 tatttgtggagagcttttggggccacttggcaggaatctgacactggccaagaataaaga 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 tatttgtggagagcttttggggccacttggcaggaatctgacactggccaagaataaaga 145

                    
Query: 601 aatgagctt 609
           |||||||||
Sbjct: 144 aatgagctt 136


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 609
Length of database: 1009
Length adjustment: 10
Effective length of query: 599
Effective length of database: 999
Effective search space:   598401
Effective search space used:   598401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)