XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTGT
AGGCTTCTTGTATGTTCATGGGTATCTCTTTCTTCAGGTTAGGAAAGTTT
TCTTCTATAATTTTATTGAAGATATTTACTGGCCCTTTAAGTTGAAAATC
TTCCTTTTCATCTACACCTATTATCCTTAGGTTTGGTCTTCTCATTGTGT
CCTGGATTTCCTGGATGTTTTGAGTTAAGATCTTTTTGGAATTTGCATTT
TCTTTGATTGTTGTGTCCATGTTTTCTATGGAATCTTCTGCACCTGAGAT
TCTCTCTTCTATCTCTTGTATTCTGTTTGTTATGCTTGCATCTATGGTTC
CTGACTTCTTTCCTAGGATTTCTATTTCCAGCGTTGTCTCTTTTAGGTTT
TCCTTATTGTTTCCACTCCCATTTTTAGATCTTGGATGGTTTTGTTCCAT
TCCATCACCTATTTGGTTGTGTTTTCCTGCAATTCTTTAAGTGATTTTTG
TGCTTCCTCTTTAAGGACTTCTACCTATTTAGTAGTTTTCTCCTGTATTT
TTTTTTCCATTTTTTATTAGGTATTTAGCTCATTTACATTTCCAATGCTA
TACCCAAAGTCCCCCATACCCACTTACCTCCCCTCCCTTATCCCCCCCCC
TTCCCCCTTTTTGTTCTCGGTGGCCACCCTCTACCCGCGCCCCTATAAAC
GTTTGCCCTCGCCCCCATGGACCTCCTCTTTTCTTG

TTTTCGATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXTACACATTACATTTTGAATGTTCTGCTGATGAGCCAAAGTTTCT
TGTTTTAGAACATTTTAGATTTTCATGTTTGAAGTCCAATTTGTATTATA
TTTAATTAGGAGAAAAGTATTTCTATATCACTTATCCTGGATCAGTCCAG
TGGATAACTCTTTGCCTATACTATAATGTCAGGTTAACATGCTGTTTATT
TATTCTTTGATGAAGAAGAAAATTTACTTTTTAGCCAGCCAGTAGGGGTG
CAAACCTTTCTTCCCAGCATTAGGGCAGCAGAAGCAGGTGGATCGTGTGA
GTTCAAGGGTAAGCTGATCTACATAGGGAGTTCTAGGACAGCCAGGGCCA
CACCAAACCGATTAACGTTTAATTTTTTTTTTTTTTATATTTCAGAAAAT
CAAAAGAAGAATATGACCAGGAGGAAGAAAGGAAACGAAAAATGCAGGTG
CTCTATGGGGATATAAATGTAGCAGAAGTGCATCTTACTGCCATTGCCAC
TCTCTAAGTTTACATCTGTCTTTTACTGTTAACATCTAAGCTTCTAGAGA
ACTCCTCAGAGCAGTCAGATTTTC

Query= MSMg01no115_i17.g1 MSMg01no115_i17.g1 CHROMAT_FILE:
MSMg01no115_i17.g1 PHD_FILE: MSMg01no115_i17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:21:31 2005
         (404 letters)



>mm_chr11_29129922_29130723
          Length = 802

 Score =  762 bits (394), Expect = 0.0
 Identities = 401/404 (99%), Gaps = 3/404 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tacacattacattttgaatgttctgctgatgagccaaagtttcttgttttagaacatttt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 tacacattacattttgaatgttctgctgatgagccaaagtttcttgttttagaacatttt 365

                                                                       
Query: 61  agattttcatgtttgaagtccaatttgtattatatttaattaggagaaaagtatttctat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 agattttcatgtttgaagtccaatttgtattatatttaattaggagaaaagtatttctat 305

                                                                       
Query: 121 atcacttatcctggatcagtccagtggataactctttgcctatactataatgtcaggtta 180
           |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||
Sbjct: 304 atcacttatcctggatcagtccagtggataa--ctttgcctatactataatgtcaggtta 247

                                                                       
Query: 181 acatgctgtttatttattctttgatgaagaagaaaatttactttttagccagccagtagg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 acatgctgtttatttattctttgatgaagaagaaaatttactttttagccagccagtagg 187

                                                                       
Query: 241 ggtgcaaacctttcttcccagcattagggcagcagaagcaggtggatcgtgtgagttcaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 ggtgcaaacctttcttcccagcattagggcagcagaagcaggtggatcgtgtgagttcaa 127

                                                                       
Query: 301 gggtaagctgatctacatagggagttctaggacagccagggccacaccaaaccgattaac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 gggtaagctgatctacatagggagttctaggacagccagggccacaccaaaccgattaac 67

                                                       
Query: 361 gtttaattttttttttttttatatttcagaaaatcaaaagaaga 404
           |||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 66  gtttaa-tttttttttttttatatttcagaaaatcaaaagaaga 24


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 404
Length of database: 802
Length adjustment: 9
Effective length of query: 395
Effective length of database: 793
Effective search space:   313235
Effective search space used:   313235
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)