Query= MSMg01no116_g08.b1 MSMg01no116_g08.b1 CHROMAT_FILE:
MSMg01no116_g08.b1 PHD_FILE: MSMg01no116_g08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:22:38 2005
(550 letters)
>mm_chr11_102848976_102849925
Length = 950
Score = 1035 bits (535), Expect = 0.0
Identities = 544/547 (99%), Gaps = 1/547 (0%)
Strand = Plus / Minus
Query: 4 ggaattcacagagtatccacttgcttctgtctctgcgcgtgctaggattaaaggcatggg 63
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 823 ggaattcacagag-atccacttgcttctgtctctgcgcgtgctaggattaaaggcatggg 765
Query: 64 ccaccacccttggcctggtaagtgatttctcaaagttactgagtctatttccctttcctt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 ccaccacccttggcctggtaagtgatttctcaaagttactgagtctatttccctttcctt 705
Query: 124 cttatatatactcctaacctatcttcaataggatcgccttcactgacgaaagcccttctt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 cttatatatactcctaacctatcttcaataggatcgccttcactgacgaaagcccttctt 645
Query: 184 ccagggcgatagcccaccattcatcaaatcagaaagttcttctgacagtctaccttaaat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 ccagggcgatagcccaccattcatcaaatcagaaagttcttctgacagtctaccttaaat 585
Query: 244 ctctcactaccgccttcagagaaaatgtaaaaaaataacaacagctacaagataaatgtt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 ctctcactaccgccttcagagaaaatgtaaaaaaataacaacagctacaagataaatgtt 525
Query: 304 tatgggtagataatgccacactattttaaaaaataccccccaaagaggaccagagggggt 363
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 tatgggtagataatgccacgctattttaaaaaataccccccaaagaggaccagagggggt 465
Query: 364 tgggaattatggtcggacacaatgctttttacactgaacatcttagcgataaatatagct 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 tgggaattatggtcggacacaatgctttttacactgaacatcttagcgataaatatagct 405
Query: 424 atgtaattttttttttctccttggcagggggaaaggctgagcctgggcagaaaggcagag 483
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 404 atgtaattttttttttctccttggcagggggaaaggctgaggctgggcagaaaggcagag 345
Query: 484 ggacccgaaaatataaatcaatatgtgactttaatatatgtgctctcggtggctgtgtgt 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 ggacccgaaaatataaatcaatatgtgactttaatatatgtgctctcggtggctgtgtgt 285
Query: 544 gctgggg 550
|||||||
Sbjct: 284 gctgggg 278
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 550
Length of database: 950
Length adjustment: 10
Effective length of query: 540
Effective length of database: 940
Effective search space: 507600
Effective search space used: 507600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no116_g08.g1 MSMg01no116_g08.g1 CHROMAT_FILE:
MSMg01no116_g08.g1 PHD_FILE: MSMg01no116_g08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:22:38 2005
(548 letters)
>mm_chr11_102760224_102761171
Length = 948
Score = 1044 bits (540), Expect = 0.0
Identities = 546/548 (99%)
Strand = Plus / Plus
Query: 1 cagaaagccaactaccctttggggattaaagatttgtgagaccaccttctgcctctggtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagaaagccaactaccctttggggattaaagatttgtgagaccaccttctgcctctggtg 260
Query: 61 acttttcatacttctataagttgggaaggtaaagagtaggggactttaaaggaagagcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acttttcatacttctataagttgggaaggtaaagagtaggggactttaaaggaagagcct 320
Query: 121 tactagagattagcctttaactcaggacacatctcacagaataggagtggcccatctttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tactagagattagcctttaactcaggacacatctcacagaataggagtggcccatctttc 380
Query: 181 caggtataaacagagtggttctgaaggaaaaagatatgacaagggtaggaaaggtttgtc 240
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 381 caggtataaacagagtggttctgaaggaaaaagatatgacgagggtaggaaaggtttgtc 440
Query: 241 agcaacgctggagaatccctcctgtgttagtcagggttctctagtcacagaatttatgga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agcaacgctggagaatccctcctgtgttagtcagggttctctagtcacagaatttatgga 500
Query: 301 acgcctctatagattaagggactttattgtgatgacgtacagtctgtagtccaactaacc 360
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 501 acgcctctatagattaagggactttattgtgatgatgtacagtctgtagtccaactaacc 560
Query: 361 caacaatgagcagctgtggatgggaagaccaaggatctagtagttgctcagtcccaccca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 caacaatgagcagctgtggatgggaagaccaaggatctagtagttgctcagtcccaccca 620
Query: 421 cgaggctagttgtttcagctggtcttctgtagaagtaggttccaacagatgtgctggcac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cgaggctagttgtttcagctggtcttctgtagaagtaggttccaacagatgtgctggcac 680
Query: 481 acctggatctaggacttgcttcgtcccaggctgaccttgaactcagagatctccttgccg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 acctggatctaggacttgcttcgtcccaggctgaccttgaactcagagatctccttgccg 740
Query: 541 agtcttct 548
||||||||
Sbjct: 741 agtcttct 748
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 548
Length of database: 948
Length adjustment: 10
Effective length of query: 538
Effective length of database: 938
Effective search space: 504644
Effective search space used: 504644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
