TTACCNGGGATCTATAATTGCGGCGCTAATACGATCACTTTCCACACGGA
CCGCGGAATTCCTAAGTTTCAATACCGCTCTGTTACCGGTAGAGTGCTGG
TGTAGCAGGTGAAAGGCATGCTGGACCCCCAGCACCTGACAGAAGGAGGA
GGGAGTGGGAAGAATAGTTTATTTTCTGTTAAAGTTACTGGTGCTTAGAC
ATCCCATGCCTAGTAGAGAGTTCACCCAACAGAAAACACCATACTTTCCC
CTAAAATAGTAAGAACTGGCTTATTAAATCTACTTCAATTAAATATTATC
CAGGTCATTTTGTTTGTTCATTTGATTGTTGTTGTTGTTTAGTATAAAAG
GATGTTTATTTGGTTATAAGGGGACCCGGAGAAGAAAGTAGAGGCAGAGA
AAGGAAGGCATAGAATGACAGAAAGGGAGGAGAGAGGAAGAGAAAGAGGA
AGAGGTCGGCTGGGGATACCTGGAGAAGAGACAGGAGACAGACAGAGTGG
ATGGACAGAGAGAGGGTGAACTGTTTTATTATAAACATGGAAGTGGCTAG
ATTTAATACAGTGGCCACTTTTTAAAATCCCTGCATGTTATATGTTATCA
GAGGAGACATTTCCCAATAAGTCCTATAATCTATACTTAAGTACATGTTA
TATAATATTTTAAAAGTACATTTGGAAAAATAAACATATGCTACTCTTAC
CCCAAACTCCCTAAAAATATACAAAATACTGTCTGT

GCAGTGCGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXAGTGAATTCAATACAGTTCAGTTTGGAGCTGC
TCAGTTCATGGAGGTTAGATGCAGTCTTTCCAAGCAGCACAATTCAGTTA
GAATTCAAAAGAAGCCTATTTAAATCAGGCAACTTGGAGAGAAGTTTGAG
CCAGAACAGCTAAGTTGAACACCCAGCCAGAGTTCAGAAAAGGCTAGAAA
AGATGAGTTTATTCAGCAGTAAGCCTCAGTAACTGAAACATTCTAGCCCT
AGATTCTCAGATAGAGGCTGGAAACTGAAGTCTTCAGAGTCTGGCTTCCA
AACCTAGGCCTAGGAAATACTCTGAGCTAAGTCCAAGCTGTATATTTGTA
AGTCTTCAGTATGGCCCTAATCTCATGTTTTATCTGAAAAAATAAAGGTG
ACATTTACATATTTTGCCTTTGGGTCTTCTGCATAATATAAAGTCCAGTT
CAGCAAAATGCTATTGTAATAGATTATAATCTACTCCTGCAATCCACAGA
ACTCAACACTTGGTAGTTGAACTCAAATCTTTACCAGAATTTGAGAAGGC
AAGTAAAGCCGAATGTTCTAAGCATCTAGTCACAGACCTGGACTAGATAA
GAGATCTCAAATGTGGTCACAGTCAGGGGTGCAAAAACAAAAGGCAGCTG
TTGGTAGGGAAATCCCAAGG

Query= MSMg01no118_b19.b1 MSMg01no118_b19.b1 CHROMAT_FILE:
MSMg01no118_b19.b1 PHD_FILE: MSMg01no118_b19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:24:51 2005
         (341 letters)



>mm_chr11_26484262_26485002
          Length = 741

 Score =  652 bits (337), Expect = 0.0
 Identities = 340/341 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   agaaagtagaggcagagaaaggaaggcatagaatgacagaaagggaggagagaggaagag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agaaagtagaggcagagaaaggaaggcatagaatgacagaaagggaggagagaggaagag 260

                                                                       
Query: 61  aaagaggaagaggtcggctggggatacctggagaagagacaggagacagacagagtggat 120
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaggggaagaggtcggctggggatacctggagaagagacaggagacagacagagtggat 320

                                                                       
Query: 121 ggacagagagagggtgaactgttttattataaacatggaagtggctagatttaatacagt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggacagagagagggtgaactgttttattataaacatggaagtggctagatttaatacagt 380

                                                                       
Query: 181 ggccactttttaaaatccctgcatgttatatgttatcagaggagacatttcccaataagt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggccactttttaaaatccctgcatgttatatgttatcagaggagacatttcccaataagt 440

                                                                       
Query: 241 cctataatctatacttaagtacatgttatataatattttaaaagtacatttggaaaaata 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cctataatctatacttaagtacatgttatataatattttaaaagtacatttggaaaaata 500

                                                    
Query: 301 aacatatgctactcttaccccaaactccctaaaaatataca 341
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aacatatgctactcttaccccaaactccctaaaaatataca 541


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 341
Length of database: 741
Length adjustment: 9
Effective length of query: 332
Effective length of database: 732
Effective search space:   243024
Effective search space used:   243024
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no118_b19.g1 MSMg01no118_b19.g1 CHROMAT_FILE:
MSMg01no118_b19.g1 PHD_FILE: MSMg01no118_b19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:24:51 2005
         (650 letters)



>mm_chr11_26550835_26551884
          Length = 1050

 Score =  872 bits (451), Expect = 0.0
 Identities = 457/459 (99%)
 Strand = Plus / Minus

                                                                        
Query: 192  tattcagcagtaagcctcagtaactgaaacattctagccctagattctcagatagaggct 251
            ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1050 tattcagcagtaagcctcagtgactgaaacattctagccctagattctcagatagaggct 991

                                                                        
Query: 252  ggaaactgaagtcttcagagtctggcttccaaacctaggcctaggaaatactctgagcta 311
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 990  ggaaactgaagtcttcagagtctggcttccaaacctaggcctaggaaatactctgagcta 931

                                                                        
Query: 312  agtccaagctgtatatttgtaagtcttcagtatggccctaatctcatgttttatctgaaa 371
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 930  agtccaagctgtatatttgtaagtcttcagtatggccctaatctcatgttttatctgaaa 871

                                                                        
Query: 372  aaataaaggtgacatttacatattttgcctttgggtcttctgcataatataaagtccagt 431
            |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 870  aaataaaggtgacatttacatattttgcctttaggtcttctgcataatataaagtccagt 811

                                                                        
Query: 432  tcagcaaaatgctattgtaatagattataatctactcctgcaatccacagaactcaacac 491
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 810  tcagcaaaatgctattgtaatagattataatctactcctgcaatccacagaactcaacac 751

                                                                        
Query: 492  ttggtagttgaactcaaatctttaccagaatttgagaaggcaagtaaagccgaatgttct 551
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750  ttggtagttgaactcaaatctttaccagaatttgagaaggcaagtaaagccgaatgttct 691

                                                                        
Query: 552  aagcatctagtcacagacctggactagataagagatctcaaatgtggtcacagtcagggg 611
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690  aagcatctagtcacagacctggactagataagagatctcaaatgtggtcacagtcagggg 631

                                                   
Query: 612  tgcaaaaacaaaaggcagctgttggtagggaaatcccaa 650
            |||||||||||||||||||||||||||||||||||||||
Sbjct: 630  tgcaaaaacaaaaggcagctgttggtagggaaatcccaa 592


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 650
Length of database: 1050
Length adjustment: 10
Effective length of query: 640
Effective length of database: 1040
Effective search space:   665600
Effective search space used:   665600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)