Query= MSMg01no118_k15.b1 MSMg01no118_k15.b1 CHROMAT_FILE:
MSMg01no118_k15.b1 PHD_FILE: MSMg01no118_k15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:25:35 2005
(645 letters)
>mm_chr11_43989477_43990521
Length = 1045
Score = 1149 bits (594), Expect = 0.0
Identities = 628/642 (97%), Gaps = 7/642 (1%)
Strand = Plus / Minus
Query: 6 gaattcaaactc--atgccctcgttgtatgtggtgatttcagcagagccatcacctcagc 63
|||||||||||| || |||| |||||||||||||||||||||||||||| |||| |
Sbjct: 865 gaattcaaactcagat--cctc---gtatgtggtgatttcagcagagccatcagctcatc 811
Query: 64 cccactagcaccatttctaagttccctggtaacacatattcatgatgaggcatttgcaaa 123
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 810 cccactagcaccatttctaagttccctggtaacacatattcatgttgaggcatttgcaaa 751
Query: 124 attaggatatttttattgtacaagaaaacatcatcactacattcatgtcctgccacttca 183
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 atcaggatatttttattgtacaagaaaacatcatcactacattcatgtcctgccacttca 691
Query: 184 atcttaacccatgtaggtttttctttctcattgtgtgatacttcgtacaagcaacatttc 243
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 690 atcttaacccatgtaggtttttctttctcattgtgtgatacttcgttcaagcaacatttc 631
Query: 244 caccagcacactgaatgcttcctgtatacacatcaccctgccaggcactgagaatagaat 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 caccagcacactgaatgcttcctgtatacacatcaccctgccaggcactgagaatagaat 571
Query: 304 tgtggtctgtgactttggtcctagcagaagtgacataaagatccaacattacaccaggga 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 tgtggtctgtgactttggtcctagcagaagtgacataaagatccaacattacaccaggga 511
Query: 364 tgaactaatttctacagagaataagtagactctacagagaataagtagagtctttggaga 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 tgaactaatttctacagagaataagtagactctacagagaataagtagagtctttggaga 451
Query: 424 taaatgggagaagtaaggtatgggtcagatgaaaggaccctgatccatcagagataatgg 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 taaatgggagaagtaaggtatgggtcagatgaaaggaccctgatccatcagagataatgg 391
Query: 484 gaaatgatgagccagaaagagaagggatgtagaggctgtgagaaggggcagtgtggacag 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 gaaatgatgagccagaaagagaagggatgtagaggctgtgagaaggggcagtgtggacag 331
Query: 544 gaaataggatgatgtctggggtaggaaaccattggtctgctatcctgatgtgagtggagg 603
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 330 gaaataggatgatgtctggggtaagaaaccattggtctgctatcctgatgtgagtggagg 271
Query: 604 cagtgacaaggtcaggtagagtggctttgtggactttggaga 645
|||||| |||||||||||||||||||||||||||||||||||
Sbjct: 270 cagtgataaggtcaggtagagtggctttgtggactttggaga 229
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1045
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1035
Effective search space: 657225
Effective search space used: 657225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no118_k15.g1 MSMg01no118_k15.g1 CHROMAT_FILE:
MSMg01no118_k15.g1 PHD_FILE: MSMg01no118_k15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:25:35 2005
(586 letters)
>mm_chr11_43872764_43873749
Length = 986
Score = 1125 bits (582), Expect = 0.0
Identities = 585/586 (99%)
Strand = Plus / Plus
Query: 1 caagggaagccggtatctcattacacagtgggcctgcccagagaaaacaaccccagacag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caagggaagccggtatctcattacacagtgggcctgcccagagaaaacaaccccagacag 260
Query: 61 gtttttgatttttatgaaccaagcctgagttttgagtagcgctagctccatacctggaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtttttgatttttatgaaccaagcctgagttttgagtagcgctagctccatacctggaga 320
Query: 121 ataattatttgtaagatgggagatattggagaaacaaatccccctaagtaaacccccttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ataattatttgtaagatgggagatattggagaaacaaatccccctaagtaaacccccttg 380
Query: 181 gtgggtagagaactgaactctgaaataagatctcagtgcttggggtcacaggggctaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtgggtagagaactgaactctgaaataagatctcagtgcttggggtcacaggggctaaga 440
Query: 241 gctataacacgaaaagcagaaagtgaggcaggttagccatgctagggtttgaagatttgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gctataacacgaaaagcagaaagtgaggcaggttagccatgctagggtttgaagatttgc 500
Query: 301 ccagggtcccaacagattttaacactgcctttgctactctcctgtctttctctttttgga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ccagggtcccaacagattttaacactgcctttgctactctcctgtctttctctttttgga 560
Query: 361 attctctctcaacctaactatttccttcccaataaagaaagtctttcttaaatgaatacc 420
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 561 attctctctcaacctaactatttccttccaaataaagaaagtctttcttaaatgaatacc 620
Query: 421 acgtttaaaggacttatcatgacttcttgttggtctgagatgaccatcaggacctggagc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 acgtttaaaggacttatcatgacttcttgttggtctgagatgaccatcaggacctggagc 680
Query: 481 tctgacccagtgtttgtgtcctctggaatctgctgccttccaggaacgttgcacattccc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tctgacccagtgtttgtgtcctctggaatctgctgccttccaggaacgttgcacattccc 740
Query: 541 ttcccagacagaaagctctgacatccttgctttggcaaaagagcca 586
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ttcccagacagaaagctctgacatccttgctttggcaaaagagcca 786
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 586
Length of database: 986
Length adjustment: 10
Effective length of query: 576
Effective length of database: 976
Effective search space: 562176
Effective search space used: 562176
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
