Query= MSMg01no119_b01.b1 MSMg01no119_b01.b1 CHROMAT_FILE:
MSMg01no119_b01.b1 PHD_FILE: MSMg01no119_b01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:26:06 2005
(452 letters)
>mm_chr11_7356569_7357420
Length = 852
Score = 760 bits (393), Expect = 0.0
Identities = 429/451 (95%), Gaps = 17/451 (3%)
Strand = Plus / Minus
Query: 1 tggctgctcgggtatactggtgacttccatctataggcagagagactcagaaagaacata 60
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 789 tggctgctcaggtatactggtgacttccatctataggcagagagactcagaaagaacatg 730
Query: 61 ggattcaaaagggttatgacccctttggaggtcacatatcagctcacctgcatgtgctat 120
|||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 729 ggattcaaaagggttatgacccctttggaggtcacatatcag----------------at 686
Query: 121 cacctatttacattatgcttcataatggtagcaaagagacaagaagcactgacccactat 180
|||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 685 cacctatttaca-tatgcttcataatggtagcaaagagacaaaaagcattgacccactat 627
Query: 181 gagcccagctctgtgtgagcagaaaccaaatgctgcagtttgatcattgaatatctctag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 gagcccagctctgtgtgagcagaaaccaaatgctgcagtttgatcattgaatatctctag 567
Query: 241 ataggaggcaaggcctgatgggaggttttgggtcaccatagaatcatttgaagaggatca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 ataggaggcaaggcctgatgggaggttttgggtcaccatagaatcatttgaagaggatca 507
Query: 301 tgggatcttagtctctttagctgtgtccaatgagaacatggttgagcctggaaggtttct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 tgggatcttagtctctttagctgtgtccaatgagaacatggttgagcctggaaggtttct 447
Query: 361 aagggatggcatctgagagggaagttcaacaaagggacaataagggtaaagaggtaggag 420
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 aagggatgacatctgagagggaagttcaacaaagggacaataagggtaaagaggtaggag 387
Query: 421 caagacaccttgctgagggaggtgtctgagt 451
|||||||||||||||||||||||||||||||
Sbjct: 386 caagacaccttgctgagggaggtgtctgagt 356
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 452
Length of database: 852
Length adjustment: 10
Effective length of query: 442
Effective length of database: 842
Effective search space: 372164
Effective search space used: 372164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no119_b01.g1 MSMg01no119_b01.g1 CHROMAT_FILE:
MSMg01no119_b01.g1 PHD_FILE: MSMg01no119_b01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:26:06 2005
(443 letters)
>mm_chr11_7240107_7240949
Length = 843
Score = 843 bits (436), Expect = 0.0
Identities = 442/444 (99%), Gaps = 1/444 (0%)
Strand = Plus / Plus
Query: 1 ttac-tacaccagcttttgttgtgtaaaccttgctctcctaattaataggtcaattaaag 59
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 ttacatacaccagcttttgttgtgtaaaccttgctctcctaattaataggtcaattaaag 259
Query: 60 gctaaagtctgtgattgggttgtagagagaggaactctacttctacaggtgggacttcat 119
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 260 gctaaagtctgtgattgggttgtagagagaggaactctacttctacagatgggacttcat 319
Query: 120 ggagggagtgaggaactctggaaagaagagaaagacccttttgtcagtacaggcctggaa 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ggagggagtgaggaactctggaaagaagagaaagacccttttgtcagtacaggcctggaa 379
Query: 180 ggtatagctagctatgtggctggatggggctaggtggttgggttaacttagatgaactag 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ggtatagctagctatgtggctggatggggctaggtggttgggttaacttagatgaactag 439
Query: 240 tttggagtgtgccagactaaggcctaagctttgagacattaaaggtctctgtgtggtttt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tttggagtgtgccagactaaggcctaagctttgagacattaaaggtctctgtgtggtttt 499
Query: 300 tgggaactagccagctaaggaaacactgatgccatattatccagctttaattaatatata 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tgggaactagccagctaaggaaacactgatgccatattatccagctttaattaatatata 559
Query: 360 gacaataatcattttatacaatcactaaggcaacatcagggtccccagacctatagggaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gacaataatcattttatacaatcactaaggcaacatcagggtccccagacctatagggaa 619
Query: 420 atggcaaagttctccagggtgggg 443
||||||||||||||||||||||||
Sbjct: 620 atggcaaagttctccagggtgggg 643
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 443
Length of database: 843
Length adjustment: 10
Effective length of query: 433
Effective length of database: 833
Effective search space: 360689
Effective search space used: 360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
