Query= MSMg01no122_c13.b1 MSMg01no122_c13.b1 CHROMAT_FILE:
MSMg01no122_c13.b1 PHD_FILE: MSMg01no122_c13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:30:19 2005
(637 letters)
>mm_chr11_11929408_11930442
Length = 1035
Score = 1181 bits (611), Expect = 0.0
Identities = 630/637 (98%), Gaps = 2/637 (0%)
Strand = Plus / Minus
Query: 1 tactctaccaactgaacttgtagccttcgccctatctcttattaaaagttttgattcaca 60
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 835 tactctaccaactgaacttgtagccttcgccggatctcttattaaaagttttgattcaca 776
Query: 61 attctatatgtgtcatggggctttatgttttacataatatccttagttttatctgtgact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 attctatatgtgtcatggggctttatgttttacataatatccttagttttatctgtgact 716
Query: 121 ttgctattaacttttgtttgtgttttcatttttaaccttaaaggacttctttgttctttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 ttgctattaacttttgtttgtgttttcatttttaaccttaaaggacttctttgttctttt 656
Query: 181 atttgttgtactggaggttgaattcagggcttcatatatgctggacaatagccccccccc 240
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 655 atttgttgtactggaggttgaattcagggcttcatatatgctggacaata--cccccccc 598
Query: 241 accagccctcttagattatgcagtagtgattagggttcaggatatattttaattcagtgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 accagccctcttagattatgcagtagtgattagggttcaggatatattttaattcagtgg 538
Query: 301 acacagcttttctacatggcccctttcgccagcatctgctactgtgccaaatcctacagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 acacagcttttctacatggcccctttcgccagcatctgctactgtgccaaatcctacagc 478
Query: 361 agagtgatagatttgttttagctagttcacttgtgttggcccattattatacccagagca 420
|||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||
Sbjct: 477 agagtgatagatttgttttagctatttctcttgtgttggcccattattatacccagagca 418
Query: 421 agcattcttcttgcacagcataacagtctagggtcactgtgcaatatctcattatttcat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 417 agcattcttcttgcacagcataacagtctagggtcactgtgcaatatctcattatctcat 358
Query: 481 ttagaaataagaatttaaagaactttccctgcatagtttcttctcatttacatatttatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 ttagaaataagaatttaaagaactttccctgcatagtttcttctcatttacatatttatt 298
Query: 541 ttgtttagcttctttgcatcctacttaatgggaagtgaagtgagcctagagatgggtagg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 ttgtttagcttctttgcatcctacttaatgggaagtgaagtgagcctagagatgggtagg 238
Query: 601 aagtagggggcctagtgagccactgtgaaactgagta 637
|||||||||||||||||||||||||||||||||||||
Sbjct: 237 aagtagggggcctagtgagccactgtgaaactgagta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1035
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1025
Effective search space: 642675
Effective search space used: 642675
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no122_c13.g1 MSMg01no122_c13.g1 CHROMAT_FILE:
MSMg01no122_c13.g1 PHD_FILE: MSMg01no122_c13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:30:19 2005
(637 letters)
>mm_chr11_11793763_11794799
Length = 1037
Score = 1193 bits (617), Expect = 0.0
Identities = 632/637 (99%)
Strand = Plus / Plus
Query: 1 gagaaaggaactgtttatgattaacagatagggttgagtcagcatgttatagggcaaccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gagaaaggaactgtttatgattaacagatagggttgagtcagcatgttatagggcaaccc 260
Query: 61 ttgtcctggcactcatctttaaagttttaatatcatgtttattaatttaggtggatttcc 120
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgtcctggcacttatctttaaagttttaatatcatgtttattaatttaggtggatttcc 320
Query: 121 aggtcaacagtcataccttctcagagtgtgccaatttgacttccttctggtctttatggg 180
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 321 aggtcaacagtcataccttctcagagtgtgccaatttgactttcttctggtctttatggg 380
Query: 181 ggacccagatacatctggctgtggggctctcacacacagcagccactgctgttgaacaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggacccagatacatctggctgtggggctctcacacacagcagccactgctgttgaacaaa 440
Query: 241 taactgctcaatctattttacaagctaaaatatattgtttataaactgaagcctttcccc 300
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 441 taactgctcaatctattttacaagctaaaatagattgtttataaactgaagcctttcccc 500
Query: 301 gtcaaaaacaatgctagtgtaaaactataattgaactataattgaaaactattatatatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtcaaaaacaatgctagtgtaaaactataattgaactataattgaaaactattatatatg 560
Query: 361 aagaagggaaaaaaagtctctgttttcactcctttgtaatagtgatacactttttacttt 420
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aagaagggaaaaaaagtctttgttttcactcctttgtaatagtgatacactttttacttt 620
Query: 421 ttaagatgtggctaccagaacacctaaaatttcagattactcaggcacctgaccccgaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttaagatgtggctaccagaacacctaaaatttcagattactcaggcacctgaccccgaaa 680
Query: 481 attcttactcctaaagaatattgaaaaacctttactttgggacaatattgattagaagca 540
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 681 attcttactcctaaagaatattgaaaaacctttactttaggacaatattgattagaagca 740
Query: 541 gttagcaagtaacctggtcctattgacattgaaaggaatgctcctaacattttgctatta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gttagcaagtaacctggtcctattgacattgaaaggaatgctcctaacattttgctatta 800
Query: 601 attataactgggaattcagtattgggttttcttctgt 637
|||||||||||||||||||||||||||||||||||||
Sbjct: 801 attataactgggaattcagtattgggttttcttctgt 837
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1037
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1027
Effective search space: 643929
Effective search space used: 643929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
