Query= MSMg01no122_n06.b1 MSMg01no122_n06.b1 CHROMAT_FILE:
MSMg01no122_n06.b1 PHD_FILE: MSMg01no122_n06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:31:44 2005
(646 letters)
>mm_chr11_8840790_8841835
Length = 1046
Score = 1172 bits (606), Expect = 0.0
Identities = 636/646 (98%)
Strand = Plus / Plus
Query: 1 cagtgagcctggatgcagggctcttctcctgggaacagtgctaaaagtagttacctggtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagtgagcctggatgcagggctcttctcctgggaacagtgctaaaagtagttacctggtt 260
Query: 61 gtcttcctagggatagcactgcttcttggatgtcgctataataggcttcaaaatctatac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtcttcctagggatagcactgcttcttggatgtcgctataataggcttcaaaatctatac 320
Query: 121 aaaaaggaaaatgaagacacaattagtaagtgttacatgctgtagactaaaacctgcccc 180
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaaaggaaaatgaaggcacaattagtaagtgttacatgctgtagactaaaacctgcccc 380
Query: 181 ctccccaccacatccccaaggaagatttgtaaggttgtaggatcagaacttcatgattat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctccccaccacatccccaaggaagatttgtaaggttgtaggatcagaacttcatgattat 440
Query: 241 ggagagttaaattttggagatcagaaccaaactatttttagtccccttaagttgtcattc 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 441 ggagagttaaattttggagatcagaaccaaactatttttagtccccttaagttgccattc 500
Query: 301 attgtctactctcaagtctgagtgaatgtcgttttgatgattagtaaagcctttaaaatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 attgtctactctcaagtctgagtgaatgtcgttttgatgattagtaaagcctttaaaatg 560
Query: 361 tattcttagcggagaactatttgctataatccacagctaaaagtgttgttgatccaaaac 420
|||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 561 tattcttagcagagaactatttgctataatccacagctaaaaatgttgttgatccaaaac 620
Query: 421 ctatatacctttttcctacttgactgtaagctaccaattggtggtcactgccaatgtatt 480
||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 621 ctatataccttttccccacttgactgtaagctaccaactggtggtcactgccaatgtatt 680
Query: 481 tgataccattttctttgttgtataactaataaattatcatgtaaccccttcctctgtgga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgataccattttctttgttgtataactaataaattatcatgtaaccccttcctctgtgga 740
Query: 541 acacattactaagggtaatctgtccctggaacactgtcactcatatcagggttaagaatg 600
|||||||| |||| |||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 741 acacattattaagagtaatctgtccctggaacactgtcactcatctcagggttaagaatg 800
Query: 601 aactatctctaagctgggacatggtggcacataccaataatgccag 646
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 aactatctctaagctgggacatggtggcacataccaataatgccag 846
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 646
Length of database: 1046
Length adjustment: 10
Effective length of query: 636
Effective length of database: 1036
Effective search space: 658896
Effective search space used: 658896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no122_n06.g1 MSMg01no122_n06.g1 CHROMAT_FILE:
MSMg01no122_n06.g1 PHD_FILE: MSMg01no122_n06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:31:44 2005
(684 letters)
>mm_chr11_8992779_8993861
Length = 1083
Score = 1160 bits (600), Expect = 0.0
Identities = 633/644 (98%), Gaps = 1/644 (0%)
Strand = Plus / Minus
Query: 1 ttatttacatgtatgaaacattctgagttagcttagcacagatataggggaagatagtgt 60
||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||
Sbjct: 643 ttatttacatgtatgaaacattc-gagttaggttagcacagatataggggaagatagtgt 585
Query: 61 atgtggcctagacacaatggtctaaaaaggccaaatagaaaaacaaaggaatgagtttta 120
| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 584 acgtggcctagacacaatggtctaaaagggccaaatagaaaaacaaaggaatgagtttta 525
Query: 121 tgatctcaacccaaggaacagaagtccacatgactattacaatacgtagctctgaatgcc 180
|| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 524 tggcctcaacccaaggaacagaagtccacatgactattacaatacatagctctgaatgcc 465
Query: 181 aagtgctgctctctggatctccttttaatcctccctggactactatgtataagctcttgc 240
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 464 aagtgctgctctctggatctccttttaatcccccctggactactatgtataagctcttgc 405
Query: 241 tgggaaaggaactcatgatggacatggagaggagtgaaaggtgcttctagtgctgctgcc 300
|||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||
Sbjct: 404 tgggaaaggaactcatgatggacatgcagaggagtggaaggtgcttctagtgctgctgcc 345
Query: 301 cagggagcacctggtgacactgcaaaggagagactgaccttactgccattttgtctcagg 360
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 344 cagggagcacctggtgacactgcaaaggagagactgaccttgctgccattttgtctcagg 285
Query: 361 taagcaggctgggtctgaggtcagatagatctgtgactctccatgttggccagaatgtaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 taagcaggctgggtctgaggtcagatagatctgtgactctccatgttggccagaatgtaa 225
Query: 421 ctcctatagaaaccatcttcggaaggctggagagatggcacagcagttaagagcactact 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 ctcctatagaaaccatcttcggaaggctggagagatggcacagcagttaagagcactact 165
Query: 481 gctttcccagaggatctaggttcaatccccattaccctgatgggaactcataactacagt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 gctttcccagaggatctaggttcaatccccattaccctgatgggaactcataactacagt 105
Query: 541 ctcagggaatgacacaccttcttctggtgtccgaaggcactgcacagacagggtgcacag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104 ctcagggaatgacacaccttcttctggtgtccgaaggcactgcacagacagggtgcacag 45
Query: 601 tcaggctaaagacccatatacacaaaataaaaacaaagggaaaa 644
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44 tcaggctaaagacccatatacacaaaataaaaacaaagggaaaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 684
Length of database: 1083
Length adjustment: 10
Effective length of query: 674
Effective length of database: 1073
Effective search space: 723202
Effective search space used: 723202
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
