MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-123J04
Chromosome	11 (Build37)
Map Location	17,363,633 - 17,363,900
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Sec61g, Akt2-ps, LOC665689, LOC627583, Egfr, 2810442I21Rik, A630050E13Rik, Plek, 1500041B16Rik, LOC100042644, Ppp3r1, Pno1, AI553587, C1d, LOC382486
Downstream gene	EG665748, Etaa1, LOC327871, LOC627696, LOC627716
Link	Open Mouse BAC browser

Click to get alignment info.

name	Sec61g (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20335 MGI:1202066
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Akt2-ps (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:111116 MGI:108506
definition	note : thymoma viral proto-oncogene 2, pseudogene pseudo : _no_value

name	LOC665689 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665689
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 275 ESTs, 8 Proteins pseudo : _no_value

name	LOC627583 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:627583
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 4 Proteins pseudo : _no_value

name	Egfr (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13649 MGI:95294
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	2810442I21Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72735 MGI:1919985
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 20 ESTs

name	A630050E13Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319701 MGI:2442569
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Plek (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56193 MGI:1860485
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1500041B16Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:380686 MGI:1917505
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042644 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042644
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 mRNAs, 439 ESTs

name	Ppp3r1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19058 MGI:107172
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pno1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66249 MGI:1913499
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	AI553587 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:103784 MGI:2144224
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	C1d (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:57316 MGI:1927354
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC382486 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:382486
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 44 Proteins pseudo : _no_value

name	EG665748 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665748 MGI:3645846
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 18 Proteins

name	Etaa1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68145 MGI:1915395
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC327871 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:327871
definition	note : glyceraldehyde-3-phosphate dehydrogenase pseudogene pseudo : _no_value

name	LOC627696 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:627696
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 Proteins pseudo : _no_value

name	LOC627716 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:627716
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Sec61g (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981498 GeneID:20335 MGI:1202066
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SEC61, gamma subunit transcript_id : NM_011343.2

name	Egfr (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:90403617 GeneID:13649 MGI:95294
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : epidermal growth factor receptor transcript_id : NM_207655.2

name	Egfr (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:90403618 GeneID:13649 MGI:95294
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : epidermal growth factor receptor transcript_id : NM_007912.4

name	2810442I21Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94389909 GeneID:72735 MGI:1919985
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 17 ESTs product : RIKEN cDNA 2810442I21 gene, transcript variant 5 transcript_id : XM_901424.2

name	2810442I21Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149261668 GeneID:72735 MGI:1919985
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 18 ESTs product : RIKEN cDNA 2810442I21 gene transcript_id : XM_001479196.1

name	2810442I21Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149261664 GeneID:72735 MGI:1919985
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 18 ESTs product : RIKEN cDNA 2810442I21 gene transcript_id : XM_001479171.1

name	2810442I21Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149261666 GeneID:72735 MGI:1919985
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 17 ESTs product : RIKEN cDNA 2810442I21 gene transcript_id : XM_001479191.1

name	A630050E13Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31342516 GeneID:319701 MGI:2442569
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA A630050E13 gene transcript_id : NM_176982.2

name	Plek (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:11464970 GeneID:56193 MGI:1860485
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pleckstrin transcript_id : NM_019549.1

name	1500041B16Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802989 GeneID:380686 MGI:1917505
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1500041B16 gene transcript_id : NM_029861.2

name	LOC100042644 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261670 GeneID:100042644
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 mRNAs, 439 ESTs product : similar to ribosomal protein L39 transcript_id : XM_001479229.1

name	Ppp3r1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84794596 GeneID:19058 MGI:107172
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type I) transcript_id : NM_024459.2

name	Pno1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114145526 GeneID:66249 MGI:1913499
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : partner of NOB1 homolog (S. cerevisiae) transcript_id : NM_025443.2

name	AI553587 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114145529 GeneID:103784 MGI:2144224
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence AI553587 transcript_id : NM_178909.4

name	C1d (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142354885 GeneID:57316 MGI:1927354
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nuclear DNA binding protein transcript_id : NM_020558.3

name	EG665748 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149261620 GeneID:665748 MGI:3645846
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 18 Proteins product : predicted gene, EG665748 transcript_id : XM_979177.2

name	Etaa1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142384332 GeneID:68145 MGI:1915395
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Ewing's tumor-associated antigen 1 transcript_id : NM_026576.2

name	Sec61g (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755450 GeneID:20335 MGI:1202066
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0005789 - endoplasmic reticulum membrane [Evidence ISS]; GO:0030176 - integral to endoplasmic reticulum membrane [Evidence ISS]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0015450 - protein translocase activity [Evidence ISS] [Evidence IEA] GO_process : GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0006605 - protein targeting [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : SEC61, gamma subunit protein_id : NP_035473.1

name	Egfr (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46560582 CCDS:CCDS24443.1 GeneID:13649 MGI:95294
definition	GO_component : GO:0016323 - basolateral plasma membrane [Evidence IDA]; GO:0030139 - endocytic vesicle [Evidence IDA]; GO:0005622 - intracellular [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0009055 - electron carrier activity [Evidence IEA]; GO:0005006 - epidermal growth factor receptor activity [Evidence IDA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IDA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IDA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0004888 - transmembrane receptor activity [Evidence ISS]; GO:0004714 - transmembrane receptor protein tyrosine kinase activity [Evidence IEA] GO_process : GO:0007166 - cell surface receptor linked signal transduction [Evidence ISS]; GO:0006118 - electron transport [Evidence IEA]; GO:0007173 - epidermal growth factor receptor signaling pathway [Evidence IDA] [Evidence ISS]; GO:0008284 - positive regulation of cell proliferation [Evidence ISS] [Evidence IDA]; GO:0046777 - protein amino acid autophosphorylation [Evidence IDA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA]; GO:0050730 - regulation of peptidyl-tyrosine phosphorylation [Evidence IMP]; GO:0007165 - signal transduction [Evidence IDA]; GO:0007169 - transmembrane receptor protein tyrosine kinase signaling pathway [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; avian erythroblastic leukemia viral (v-erb-b) oncogene homolog; waved 2 product : epidermal growth factor receptor isoform 1 protein_id : NP_997538.1

name	Egfr (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6681283 CCDS:CCDS24444.1 GeneID:13649 MGI:95294
definition	GO_component : GO:0016323 - basolateral plasma membrane [Evidence IDA]; GO:0030139 - endocytic vesicle [Evidence IDA]; GO:0005622 - intracellular [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0009055 - electron carrier activity [Evidence IEA]; GO:0005006 - epidermal growth factor receptor activity [Evidence IDA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IDA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IDA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0004888 - transmembrane receptor activity [Evidence ISS]; GO:0004714 - transmembrane receptor protein tyrosine kinase activity [Evidence IEA] GO_process : GO:0007166 - cell surface receptor linked signal transduction [Evidence ISS]; GO:0006118 - electron transport [Evidence IEA]; GO:0007173 - epidermal growth factor receptor signaling pathway [Evidence IDA] [Evidence ISS]; GO:0008284 - positive regulation of cell proliferation [Evidence ISS] [Evidence IDA]; GO:0046777 - protein amino acid autophosphorylation [Evidence IDA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA]; GO:0050730 - regulation of peptidyl-tyrosine phosphorylation [Evidence IMP]; GO:0007165 - signal transduction [Evidence IDA]; GO:0007169 - transmembrane receptor protein tyrosine kinase signaling pathway [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; avian erythroblastic leukemia viral (v-erb-b) oncogene homolog; waved 2 product : epidermal growth factor receptor isoform 2 protein_id : NP_031938.1

name	2810442I21Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82933716 GeneID:72735 MGI:1919985
definition	codon_start : 1 product : hypothetical protein LOC72735 isoform 5 protein_id : XP_906517.1

name	2810442I21Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149261667 GeneID:72735 MGI:1919985
definition	codon_start : 1 product : hypothetical protein LOC72735 protein_id : XP_001479241.1

name	2810442I21Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149261669 GeneID:72735 MGI:1919985
definition	codon_start : 1 product : hypothetical protein LOC72735 protein_id : XP_001479246.1

name	2810442I21Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149261665 GeneID:72735 MGI:1919985
definition	codon_start : 1 product : hypothetical protein LOC72735 protein_id : XP_001479221.1

name	A630050E13Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28892819 CCDS:CCDS24445.1 GeneID:319701 MGI:2442569
definition	codon_start : 1 note : novel F-box domain containing protein product : hypothetical protein LOC319701 protein_id : NP_795956.1

name	Plek (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:11464971 CCDS:CCDS24446.1 GeneID:56193 MGI:1860485
definition	GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA] codon_start : 1 product : pleckstrin protein_id : NP_062422.1

name	1500041B16Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:62000629 CCDS:CCDS24447.1 GeneID:380686 MGI:1917505
definition	codon_start : 1 product : hypothetical protein LOC380686 protein_id : NP_084137.1

name	LOC100042644 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261671 GeneID:100042644
definition	codon_start : 1 product : similar to ribosomal protein L39 protein_id : XP_001479279.1

name	Ppp3r1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84794597 CCDS:CCDS24448.1 GeneID:19058 MGI:107172
definition	GO_function : GO:0005509 - calcium ion binding [Evidence IEA] GO_process : GO:0001837 - epithelial to mesenchymal transition [Evidence IMP]; GO:0007507 - heart development [Evidence IMP] codon_start : 1 note : PP2B beta 1 product : protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type I) protein_id : NP_077779.2

name	Pno1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13384846 CCDS:CCDS24449.1 GeneID:66249 MGI:1913499
definition	GO_function : GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : putatative 28 kDa protein protein_id : NP_079719.1

name	AI553587 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30725770 CCDS:CCDS24450.1 GeneID:103784 MGI:2144224
definition	codon_start : 1 product : hypothetical protein LOC103784 protein_id : NP_849240.1

name	C1d (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542251 CCDS:CCDS24451.1 GeneID:57316 MGI:1927354
definition	GO_component : GO:0017053 - transcriptional repressor complex [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0016922 - ligand-dependent nuclear receptor binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA]; GO:0003714 - transcription corepressor activity [Evidence IDA] GO_process : GO:0016481 - negative regulation of transcription [Evidence IDA] codon_start : 1 note : small unique nuclear co-repressor product : nuclear DNA-binding protein protein_id : NP_065583.2

name	EG665748 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149261621 GeneID:665748 MGI:3645846
definition	codon_start : 1 product : hypothetical protein protein_id : XP_984271.2

name	Etaa1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23956180 CCDS:CCDS24452.1 GeneID:68145 MGI:1915395
definition	codon_start : 1 exception : mismatches in translation product : ETAA16 protein protein_id : NP_080852.1

name	LOC382486 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:382486
definition	number : 2 pseudo : _no_value

name	LOC382486 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:382486
definition	number : 1 pseudo : _no_value

name	LOC627696 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:627696
definition	number : 1 pseudo : _no_value

name	LOC627716 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:627716
definition	number : 2 pseudo : _no_value

name	LOC627716 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:627716
definition	number : 1 pseudo : _no_value

name	LOC665689 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149261663 GeneID:665689
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 275 ESTs, 8 Proteins product : similar to ubiquitin-like domain containing CTD phosphatase 1 pseudo : _no_value transcript_id : XR_001770.2

name	LOC627583 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149261619 GeneID:627583
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 4 Proteins product : similar to RIKEN cDNA 2610208M17 gene pseudo : _no_value transcript_id : XR_032980.1

clone name	MSMg01-321P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-305O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-169L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-326H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504C21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-128D12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-464I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-294F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-234N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-162A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-546L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-159F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-050O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-288N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-173H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-266O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388O22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-328O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-492G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-492G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541N06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-263A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425L12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-150I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-267J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-264F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-528I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-120D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-430C21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-123J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-160J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-161N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383J13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-206B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-413E20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417N09
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-369M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-208G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-218D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-208P07
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-415I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-492G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382H12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423E08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-280K18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-273K11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-543F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-075K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357I12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-105B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-308A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-364M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485K09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531C18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-159M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-163I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-209M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-456A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-181F08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346H24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-420K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058E17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078K07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269D06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-099H11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-107K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121F23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-200A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001D18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307B14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-350G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182F18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230I18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270L17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322C15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313D01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-323G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005G22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062K23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-339P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344C04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229H11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-171P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208D19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183K05
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-123J04.T7 (MSMg01no123_j04.b1)	MSMg01-123J04.TJ (MSMg01no123_j04.g1)
ACC	AG333143	AG333144
length	1,249	1,394
length of high quality (start - end)	267 (124 - 390)	---
definition	CHROMAT_FILE: MSMg01no123_j04.b1 PHD_FILE: MSMg01no123_j04.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 18:33:29 2005	CHROMAT_FILE: MSMg01no123_j04.g1 PHD_FILE: MSMg01no123_j04.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 18:33:29 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	AGGAATCCTCNCGGCTATGGGCGCTATAGACTACTAAGGGAGAGGATCGC GGAATTCTCAGACAGTCAAGACTACCTTTAGGCTCTTCAAAACCCATTTC TCGTGTCTTTAAACTCCTTAAGACCCCCCCCAAAGCTATCTGACATGGTT GTTATGGTTATCTTAGTCCCATCTCTCTCCAGCATCCACAGGCCCATTCC TGTAGCCTTTCTCATTCTTCAAGACACAGTCCAAGCTTGTCTTTGGTGAT AATATGGGATACCATGCCTGTGGGAGTAGTTCTGATGCTACTGTCCTATT CCCCAATTGGTTCTTGATCTGTCAGTAAGGAAGCCATGGTCTAATTGCTG GGTGGAAGGGATAGGCAGGACTTCCAGGTCCCTGAAGGCAAGCAGATGGA TTCTATTTTTTAAGGGGAGAGTTCACCATGTTTCTGACGTAGAAAAGTTG ACCAGTTTTTTTTTATCTCGAAATGGAGTGGTCACACCGGATCCTAAAAG AGGGTGGTGGTCAGGGGTATTTAGCTGGGACTATATGTAACTGATCAACT AAAGTTTATGGCACGTGGGAGGCGCAGAGCTAAGACTATTAATATGGGCC CACTACTTGCACAAGTTTAATAATGCCCTGCAATTGTGCCTAGAGAGGTT CGAAATGAACAATATGTGTGCCTGTGTCTTTTATCTCTGTTGTATTCAAG CCAATCTGGTTGGCCAACTAATAACGTGCTGTTCCTTTCCCGGAATTTAC GAAGGGGTACCCTATAACTTCACATGCCAATCATTTATGTCCTTCCTTGA CCTACCTACTTTGCCTGTTTTTGCCTCTTTTCCGCTACACCCCCCTTTGC ATACTAAAATGCTTCATCATCCTCATCTTTCTTTCCCCCTTTCGATTTCC TCCCTACTGGTCCATCATCCCTCACTTCTTTTCTCCTTACACCGGCCTCC CCCCCTTTTTTCCTCGCCCCCCACTCTGTCCTTTTCACCACCTCTCTCAT CTCTTCCCTATCCACCACTTTCTTCTTTCCCCCCCTCTCTCCCTCTTTCT TCAAATCCTTTACCCTCCCCTTCTCCCCTTTCTCCCTCTTACCTCTTCTT CTCTTCCTATTTGTTCTTTCTCTTCTCACTTCTTCCCTTGCGTCTCCTCT TTCTATCTCTCTTCCCCTCTACTTCCTTATCCCTTCTACTTCCTACTCTC TCTACTCTCTTCTCCTGCTCGACTCTACTTCTACCCTACTCAACTTCCC	CTCCAACGACGGAGCTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXCCTTAAAGCCCCCCGAATTNAGNGANNGGNTGGATT TGNCCTTTAAGAAACACCGACTGGCAGCCAGAGAAAGGAAGAAGTTCAAG TACTTTGGGAGACTTTAAAGGACCAGATTGGACCAAGGAAATGAAGCTAG GGATGGACCACAAGGCTCCCTAGTGGAGACCCGCCCCGTGACCCGTCCCC CTTACACTTTTACTGGGGGAAATTTGAACCCGGGCTAAAAAAAACACCCC GTCTCCGAAAACCCCCCCCAAACCCCCTGGGGGTGCCCCGGGGCTTTAAA CGCCCCCCCCGGCCCCCCCCCCCCCCCCCCCCAACGCGCTTTTTTTTTGC GCTTTTTTCCGCCGCACGGGGGAAAAAAAACAACAACTTTCGGGGGGGCC CCTCTTCTGCGGGGGCCCCCCCCCCCCCCCTCTCNNNNNTTCTCCCACCA AACTCCCCCCCCCCCCCCCTCCCCTCTTTAAAGCCACCCCCCCTCCCCCC CCCCCCCCCCCAAGACACCCCCCCCCCCCCCCCGGAGTCTTTTCACTCAT CGAAATCCCCNNCNNNTCGNNNNNNNNTCCCNNCNNNGNTANNNCCTCTC CNCCTCCCCCCTCCCCCTCCCCCCCCCCTCCCCCCCCCCTCCCCTCTCCC TCCCCCTCTCTCCTCCCCCCCCCNNNNNNCCCCANCCCCTCCCACTCCTC TTTCTCCCTTTCCCCCCCCCTTCTCTTACCTACCCCTTATCCCCCCTTCC TCCCCCCCCAACCCCCGTCCCCTCCTTNCNTTCTCCNNNNNNNNCTTTCG TCCCTCCCTCCCCCTCCTATCCCCACTCTCCCCCCCCCCTTCACTCTTCC CCCCTCCCCCCCCTCTCCCNCCTTCCCCCCCACCCCCTCCCCCCCCCCCC CCCCTCTTCCACCTCCCCTCCTCTTCCCCCCCTCTCCTCTTCCCCCTCCC CCCCCCTCTCCCCTCCCCTCCCCCCACCCCCTCACCCACCTCCCTCCCCT TCTCCCCCCTCCCCTCTCCCACCCCCTCCTTCTTCCTCTTTCCCCACCCC CCCCCCAGCCCCCCCTCTTCCCCAATCCCCCTCCCTCCCCCCCCTCCCCC CCTCCCCCCCCACCCTTCTTCTCCCCCTCTCCCCTTCCCCCNNCAATTCT TCCNTCCCCCTCCCTCCTCGCTCCCCCCTCTCCTCTTTCCCCCCTCCCCC CCCCCCCCCTCTCCTCCCCCCCCCCCTCCCCCTCCCTCCTCTCCCTCTCC TTCCTCCCCACTCCCCTTCCCCCCCCCCTTCCTCCACTCTCTTCCCTTCC CATTCCCTCCCTCTCGCCACATTCTTTCCTCTCCTCCTCTCTCC
quality values	Open. Hide. 6 6 8 6 6 6 6 8 8 3 0 3 6 6 6 6 6 6 9 9 9 9 8 10 9 8 8 7 8 10 11 11 8 8 8 8 8 15 21 28 24 25 23 19 17 12 11 10 13 13 18 17 17 26 29 26 15 9 9 9 10 22 20 28 15 20 20 24 30 21 21 11 9 11 11 11 10 10 10 9 9 10 10 10 10 10 11 11 13 15 23 23 28 28 37 37 57 44 44 40 39 34 28 28 28 26 26 28 37 37 37 27 21 15 9 9 10 10 8 8 8 8 10 13 21 32 33 33 30 30 28 32 22 30 23 22 22 29 36 43 57 43 43 43 34 34 36 39 39 48 42 44 48 48 48 54 48 50 50 42 42 47 31 28 29 19 14 25 32 39 43 41 48 57 57 39 39 37 37 28 28 24 33 36 44 32 36 28 23 18 21 24 24 32 37 37 47 40 40 35 35 24 24 12 27 27 27 32 43 50 35 35 37 50 50 57 48 43 43 35 29 29 43 43 47 35 35 35 42 42 38 38 38 43 43 43 52 57 57 52 54 57 57 57 52 52 52 52 57 52 52 52 57 57 57 43 41 39 43 44 43 52 45 52 52 57 43 43 39 24 19 24 16 24 32 43 43 52 52 57 52 52 52 52 52 43 43 32 32 35 32 38 23 32 32 43 43 54 54 52 52 52 52 54 57 57 57 59 50 37 35 35 43 50 46 57 50 57 44 44 28 28 22 23 24 33 36 35 35 37 44 32 28 17 20 20 24 19 23 28 36 39 47 47 47 47 41 41 41 37 32 28 23 24 20 25 20 32 28 37 37 37 31 26 15 14 14 23 28 37 43 36 41 28 23 23 28 32 37 30 32 32 39 32 33 23 28 23 25 23 23 18 18 13 13 13 28 21 30 17 16 13 8 8 8 8 8 11 12 11 10 10 8 10 21 23 28 28 32 32 39 23 21 11 11 12 21 17 18 13 13 13 21 24 30 40 28 32 23 24 14 14 14 24 24 39 39 37 37 30 28 24 19 13 12 12 12 12 10 19 19 20 7 10 6 6 8 8 11 12 12 28 23 37 33 39 34 30 19 15 15 11 12 11 9 12 9 9 9 9 12 18 9 10 9 10 10 10 10 10 10 16 12 15 15 15 16 16 23 18 18 12 11 11 19 15 20 20 32 34 30 24 13 12 10 19 13 11 11 11 19 18 13 14 14 19 21 15 15 15 12 22 22 15 12 11 12 11 11 11 15 12 15 15 19 23 19 10 10 8 8 9 8 8 8 8 8 8 9 11 12 11 11 11 16 9 10 10 11 11 11 11 8 8 8 8 8 8 13 10 11 11 16 12 11 11 12 11 11 10 10 12 10 12 8 8 8 8 10 9 9 9 10 9 11 13 18 21 14 12 8 10 8 8 10 10 15 16 16 19 13 11 11 14 23 12 12 10 8 8 8 8 8 8 9 9 12 15 8 12 6 9 10 10 12 15 13 12 12 12 12 10 9 9 10 9 9 11 11 11 11 11 16 12 9 8 8 8 8 8 8 15 20 15 13 11 9 9 8 8 6 7 8 8 10 10 11 10 13 11 11 11 10 9 9 9 12 9 11 11 8 8 8 8 8 9 11 10 8 8 8 8 8 8 9 12 12 11 11 10 8 8 8 10 10 13 22 13 10 10 8 8 8 8 8 8 8 8 8 8 8 8 8 11 11 11 12 11 12 11 9 9 9 9 9 8 8 10 8 8 8 10 9 8 8 8 8 8 8 8 8 8 9 10 10 10 10 10 10 8 8 6 6 8 8 6 8 8 8 9 8 8 6 6 8 8 11 10 8 10 9 9 8 8 8 10 10 10 13 10 12 12 11 11 11 11 11 11 10 10 8 8 8 8 7 7 10 8 6 6 8 8 12 10 12 16 12 11 10 10 8 8 8 8 8 8 8 10 9 12 12 11 11 10 10 8 8 8 10 10 8 8 8 8 8 8 9 9 8 8 8 10 8 8 8 12 8 8 8 8 9 10 10 10 10 12 8 9 8 8 8 8 8 7 7 8 8 9 10 10 10 10 10 10 13 8 10 10 10 11 12 11 10 10 10 10 8 8 9 9 9 9 9 9 8 8 8 10 10 8 9 10 10 9 6 8 8 8 8 8 8 8 8 10 9 8 10 8 10 10 13 12 13 10 10 10 10 12 10 9 8 8 8 8 8 8 9 9 8 8 10 10 10 8 10 10 11 10 8 8 8 8 8 8 6 6 6 8 8 11 8 8 6 6 8 8 8 9 9 9 9 11 10 8 8 8 8 8 10 10 12 12 10 10 10 11 11 15 11 11 11 12 11 10 10 8 8 8 8 8 8 8 8 8 7 9 8 7 6 8 8 9 8 8 6 6 11 8 8 8 8 15 12 12 12 13 13 10 11 9 9 10 8 10 10 10 10 10 8 8 6 6 8 8 11 10 10 7 7 8 8 9 9 9 10 12 10 11 12 10 8 6 6 8 8 8 8 9 9 9 10 9 9 9 9 9 9 8 8 8 8 8 10 10 10 8 8 8 8 8 8 8 9 9 10 10 11 9 9 8 8 8 8 8 8 8 10 10 11 9 9 10 8 10 9 10 12 10 8 10 8 8 8 9 11 11 11 11 11 8 8 8 10 10 10 10 10 8 8 8 8 8 7 8 12 11 10 10 8 8 8 8 8 8 8 8 11 13 12 10 8 9 9 9 8 13 13 10 8 8 8 8 8 8 7 6 8 8 11 8 8 8 8 10 9 8 8 8 8 8 8 8 8 8 10 8 8 8 13 8 8 9 9 8 8 8 11 8 8	Open. Hide. 7 8 8 8 8 9 9 7 7 7 8 8 8 11 10 9 9 8 8 8 11 8 11 3 0 3 3 0 3 8 8 8 8 8 9 17 17 20 25 23 21 19 12 12 10 10 9 18 21 32 47 59 48 48 48 40 34 33 25 25 25 25 11 10 9 9 9 9 9 8 8 9 9 11 17 14 12 12 15 11 14 20 3 0 3 3 0 3 3 0 0 3 3 0 3 19 19 33 37 23 23 3 0 3 16 11 11 11 11 12 12 10 9 9 9 9 9 10 10 11 12 8 9 9 8 8 12 23 18 34 34 59 38 19 14 14 16 23 22 37 32 27 22 28 19 16 10 10 10 10 10 11 11 11 11 21 16 22 32 39 17 15 12 8 8 8 10 12 19 24 24 15 13 7 7 8 8 10 10 10 9 12 9 9 12 12 10 11 8 8 8 8 8 8 8 8 8 8 8 9 13 13 14 11 9 9 11 15 7 6 6 6 6 9 12 11 12 11 11 11 10 10 9 9 9 9 10 10 10 17 14 9 9 9 8 8 10 11 8 8 8 8 8 8 8 8 8 8 12 24 12 13 8 8 6 6 8 8 9 9 8 8 6 6 6 9 8 9 8 10 8 8 8 8 10 10 8 8 8 8 8 8 16 12 12 12 11 10 10 9 9 8 8 8 6 6 6 8 10 8 10 11 11 11 11 11 8 8 8 8 8 9 10 15 15 20 15 10 8 8 8 10 9 9 9 9 9 9 10 13 11 13 8 8 8 10 19 13 10 10 16 15 8 8 8 8 10 8 9 8 8 9 8 13 9 8 8 8 10 8 6 6 6 8 8 8 10 19 19 17 12 12 10 16 8 9 9 10 9 8 8 6 6 8 10 8 6 6 8 8 17 21 23 25 19 13 8 8 8 8 8 8 8 7 8 10 10 10 10 10 10 11 9 9 12 12 11 11 10 10 11 11 17 11 16 13 8 8 8 8 6 6 8 8 8 8 8 8 8 8 8 8 8 8 8 8 6 6 8 8 8 8 8 9 9 9 8 8 6 8 8 8 9 9 10 10 10 12 15 21 16 13 13 21 21 30 19 19 15 8 8 8 8 3 0 0 0 0 0 3 8 8 6 6 8 6 6 6 8 8 8 8 10 10 10 13 12 14 14 14 19 19 28 22 28 17 16 15 13 10 10 10 9 9 9 13 10 11 10 8 8 8 6 6 8 8 10 10 10 11 22 13 10 8 8 12 12 14 14 28 28 29 29 19 19 19 24 14 12 9 8 8 8 6 6 8 8 8 8 10 9 13 13 29 32 33 33 33 26 16 15 11 11 11 9 9 11 11 9 11 9 7 6 8 8 8 8 8 8 8 8 6 6 8 8 6 7 7 6 3 0 0 3 0 0 0 3 6 3 0 0 0 0 0 0 0 0 3 6 8 3 0 0 3 0 0 0 3 0 3 3 0 0 0 3 9 9 9 8 8 3 0 3 8 8 8 8 10 10 10 10 11 12 19 13 14 8 8 8 8 10 10 16 16 14 21 19 14 13 8 12 8 8 8 12 10 8 8 8 8 8 8 8 8 8 8 8 10 10 8 6 6 8 6 8 8 8 8 8 10 10 8 10 10 11 10 10 9 9 9 9 17 3 0 0 0 0 0 0 3 15 13 10 3 0 3 9 9 10 13 11 8 8 8 8 8 8 8 8 15 8 8 8 10 8 8 10 8 9 9 11 11 12 10 12 13 12 10 10 8 8 8 8 8 8 9 8 8 10 14 14 9 9 9 18 21 11 11 11 11 11 16 12 21 12 8 8 8 8 8 8 10 11 11 10 11 11 11 8 8 6 7 8 8 9 9 9 10 14 16 10 8 6 6 6 6 3 0 3 0 3 6 6 8 8 3 0 0 0 0 0 0 0 0 3 8 6 6 6 6 8 10 14 8 8 9 8 8 12 8 10 8 8 6 6 8 6 6 8 8 12 13 10 8 8 6 6 8 8 12 22 19 22 22 10 10 10 17 12 11 11 11 11 13 13 11 15 13 12 15 10 10 9 9 9 9 10 11 19 24 24 30 15 14 10 9 10 9 3 0 3 6 6 8 8 13 11 11 11 8 8 8 8 8 8 10 8 8 8 10 13 17 24 33 19 17 10 10 10 8 12 15 15 15 9 8 8 10 10 7 6 6 6 10 12 12 13 10 10 10 11 11 11 12 12 22 22 21 14 14 18 21 12 11 8 8 8 8 8 11 11 14 14 12 12 14 10 19 10 13 16 15 10 10 11 10 10 10 6 6 8 8 8 8 10 9 9 9 9 9 9 14 13 8 8 8 8 10 10 10 8 9 9 9 9 10 10 10 10 10 10 8 8 8 8 8 8 8 8 8 8 6 6 8 8 10 10 9 15 10 10 8 8 6 7 10 10 12 10 8 8 8 8 10 11 8 7 7 8 6 6 6 6 8 8 8 8 8 8 10 12 13 15 11 6 6 8 10 13 16 15 9 9 8 8 6 6 7 6 8 19 17 25 25 21 19 12 8 8 8 10 13 8 8 8 8 9 12 12 10 14 12 14 9 9 9 12 12 19 14 17 11 11 7 6 8 8 15 12 8 8 8 8 8 8 11 13 16 12 15 10 9 9 12 10 8 8 6 6 8 10 18 19 13 13 13 8 8 7 7 8 8 8 13 8 8 15 19 15 10 3 0 0 3 6 8 8 6 6 8 8 23 3 0 3 9 9 8 8 6 6 8 8 9 8 8 6 6 6 6 6 6 8 8 18 8 10 6 6 6 6 8 8 10 10 8 8 10 10 10 10 9 14 12 12 12 16 15 16 12 12 11 16 19 19 20 8 8 6 6 8 8 10 11 13 10 10 14 12 18 12 12 12 12 12 11 11 12 21 16 12 8 8 8 15 6 6 8 8 8 10 10 9 10 8 8 8 8 13 12 11 11 10 10 9 9 12 10 10 10 10 10 10 16 11 11 11 10 10 13 13 19 21 21 10 8 10 10 10 8 8 8 8 8 8 9 9 10 9 10 8 8 6 6 10 8 8 8 10 8 8 8 8 8 8 11 8 8 8 8 8 10 10 6 7 7 7 8 8 11 14 8 8 6 6 8 8 11 13 8 8 6 6 8 8 8 12 10 10 8 8 8 13 9

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no123_j04.b1 MSMg01no123_j04.b1 CHROMAT_FILE:
MSMg01no123_j04.b1 PHD_FILE: MSMg01no123_j04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:33:29 2005
         (267 letters)



>mm_chr11_17363552_17364219
          Length = 668

 Score =  511 bits (264), Expect = e-149
 Identities = 267/268 (99%), Gaps = 1/268 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   cccc-ccccaaagctatctgacatggttgttatggttatcttagtcccatctctctccag 59
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 ccccaccccaaagctatctgacatggttgttatggttatcttagtcccatctctctccag 290

                                                                       
Query: 60  catccacaggcccattcctgtagcctttctcattcttcaagacacagtccaagcttgtct 119
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 catccacaggcccattcctgtagcctttctcattcttcaagacacagtccaagcttgtct 230

                                                                       
Query: 120 ttggtgataatatgggataccatgcctgtgggagtagttctgatgctactgtcctattcc 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 ttggtgataatatgggataccatgcctgtgggagtagttctgatgctactgtcctattcc 170

                                                                       
Query: 180 ccaattggttcttgatctgtcagtaaggaagccatggtctaattgctgggtggaagggat 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 ccaattggttcttgatctgtcagtaaggaagccatggtctaattgctgggtggaagggat 110

                                       
Query: 240 aggcaggacttccaggtccctgaaggca 267
           ||||||||||||||||||||||||||||
Sbjct: 109 aggcaggacttccaggtccctgaaggca 82


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 267
Length of database: 668
Length adjustment: 9
Effective length of query: 258
Effective length of database: 659
Effective search space:   170022
Effective search space used:   170022
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information