MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-123L24
Chromosome	11 (Build37)
Map Location	51,014,676 - 51,014,954
singlet/doublet	singlet
Overlap gene	5133400J02Rik
Upstream gene	Sqstm1, Mgat4b, Ltc4s, Maml1, Canx, 1700121K02Rik, Hnrph1, Rufy1, Adamts2, Zfp354c, 9630041N07Rik, Grm6, Zfp454, Zfp2, Zfp354b, Prop1, Olfr1379-ps1, Olfr1378, Olfr1377, Olfr226-ps1, Olfr51, Olfr54, Olfr1375-ps1, Zfp354a, LOC100040275, LOC382518, Olfr1374-ps1
Downstream gene	LOC622699, BC049762, Clk4, Col23a1, Agxt2l2, Hnrpab, Nola2, Rmnd5b, C330016O10Rik, D930048N14Rik, 0610009B22Rik, Sec24a, LOC100040402, Sar1b, Phf15, D11Ertd497e, Ube2b, Cdkl3, LOC100040437, Ppp2ca, Olfr1373, Olfr1372-ps1
Link	Open Mouse BAC browser

Click to get alignment info.

name	Sqstm1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18412 MGI:107931
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mgat4b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:103534 MGI:2143974
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ltc4s (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17001 MGI:107498
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Maml1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:103806 MGI:1890504
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Canx (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12330 MGI:88261
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700121K02Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76653 MGI:1923903
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs, 1 Protein

name	Hnrph1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:59013 MGI:1891925
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rufy1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:216724 MGI:2429762
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Adamts2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:216725 MGI:1347356
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zfp354c (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:30944 MGI:1353621
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	9630041N07Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:214779 MGI:3053099
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Grm6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108072 MGI:1351343
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zfp454 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:237758 MGI:2679253
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zfp2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22678 MGI:99167
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 4 mRNAs

name	Zfp354b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:27274 MGI:1351476
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Prop1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19127 MGI:109330
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Olfr1379-ps1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:404506 MGI:3031213
definition	gene_synonym : MOR129-5_p note : olfactory receptor 1379, pseudogene 1 pseudo : _no_value

name	Olfr1378 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:258912 MGI:3031212
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Olfr1377 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:258913 MGI:3031211
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Olfr226-ps1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:258202 MGI:3030060
definition	gene_synonym : MOR129-4P note : olfactory receptor 226, pseudogene 1 pseudo : _no_value

name	Olfr51 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18351 MGI:1333747
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Olfr54 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18354 MGI:1333750
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Olfr1375-ps1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:258509 MGI:3031209
definition	gene_synonym : MOR126-2; RP23-217L7.2 note : olfactory receptor 1375, pseudogene 1 pseudo : _no_value

name	Zfp354a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21408 MGI:103172
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040275 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040275
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC382518 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:382518
definition	note : tubulin alpha-4 pseudogene pseudo : _no_value

name	Olfr1374-ps1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:257969 MGI:3031208
definition	gene_synonym : MOR256-44P note : olfactory receptor 1374, pseudogene 1 pseudo : _no_value

name	5133400J02Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71297 MGI:1918547
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	LOC622699 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:622699
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 2 Proteins

name	BC049762 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:193286 MGI:3039622
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Clk4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12750 MGI:1098551
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Col23a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:237759 MGI:2653243
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Agxt2l2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72947 MGI:1920197
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hnrpab (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15384 MGI:1330294
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nola2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:52530 MGI:1098547
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rmnd5b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66089 MGI:1913339
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	C330016O10Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:212706 MGI:2442218
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	D930048N14Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:97775 MGI:2144709
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 26 ESTs

name	0610009B22Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66050 MGI:1913300
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sec24a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77371 MGI:1924621
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040402 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040402
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Sar1b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66397 MGI:1913647
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Phf15 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76901 MGI:1924151
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	D11Ertd497e (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:52626 MGI:1261797
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ube2b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22210 MGI:102944
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cdkl3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:213084 MGI:2388268
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040437 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040437
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 13 ESTs

name	Ppp2ca (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19052 MGI:1321159
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Olfr1373 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:211472 MGI:3031207
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Olfr1372-ps1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:257871 MGI:3031206
definition	gene_synonym : GA_x5J8B7TR6JS-3-632; MGC67752; MOR256-54P; NP_TR6JSE50FPA note : olfactory receptor 1372, pseudogene 1 pseudo : _no_value

name	Sqstm1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130186 GeneID:18412 MGI:107931
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sequestosome 1 transcript_id : NM_011018.2

name	Mgat4b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33239191 GeneID:103534 MGI:2143974
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mannoside acetylglucosaminyltransferase 4, isoenzyme B transcript_id : NM_145926.2

name	Ltc4s (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6678733 GeneID:17001 MGI:107498
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : leukotriene C4 synthase transcript_id : NM_008521.1

name	Maml1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31341628 GeneID:103806 MGI:1890504
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mastermind like 1 (Drosophila) transcript_id : NM_175334.2

name	Canx (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31542338 GeneID:12330 MGI:88261
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : calnexin transcript_id : NM_007597.2

name	1700121K02Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149261874 GeneID:76653 MGI:1923903
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs, 1 Protein product : RIKEN cDNA 1700121K02 gene transcript_id : XM_484016.4

name	Hnrph1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125628660 GeneID:59013 MGI:1891925
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : heterogeneous nuclear ribonucleoprotein H1 transcript_id : NM_021510.2

name	Rufy1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142388074 GeneID:216724 MGI:2429762
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RUN and FYVE domain containing 1 transcript_id : NM_172557.2

name	Adamts2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130291 GeneID:216725 MGI:1347356
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 2 transcript_id : NM_175643.2

name	Zfp354c (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113681198 GeneID:30944 MGI:1353621
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 354C transcript_id : NM_013922.4

name	9630041N07Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802593 GeneID:214779 MGI:3053099
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 9630041N07 gene transcript_id : NM_173387.2

name	Grm6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:27734061 GeneID:108072 MGI:1351343
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutamate receptor, metabotropic 6 transcript_id : NM_173372.1

name	Zfp454 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982551 GeneID:237758 MGI:2679253
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 454 transcript_id : NM_172794.2

name	Zfp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113374187 GeneID:22678 MGI:99167
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 2 transcript_id : NM_001044700.1

name	Zfp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113374179 GeneID:22678 MGI:99167
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 2 transcript_id : NM_001044699.1

name	Zfp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113374177 GeneID:22678 MGI:99167
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 2 transcript_id : NM_001044698.1

name	Zfp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113374175 GeneID:22678 MGI:99167
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 2 transcript_id : NM_001044697.1

name	Zfp354b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:24475952 GeneID:27274 MGI:1351476
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 354B transcript_id : NM_013744.2

name	Prop1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6679480 GeneID:19127 MGI:109330
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : paired like homeodomain factor 1 transcript_id : NM_008936.1

name	Olfr1378 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22129068 GeneID:258912 MGI:3031212
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 1378 transcript_id : NM_146910.1

name	Olfr1377 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22129070 GeneID:258913 MGI:3031211
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 1377 transcript_id : NM_146911.1

name	Olfr51 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:49170065 GeneID:18351 MGI:1333747
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 51 transcript_id : NM_146909.1

name	Olfr54 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22203766 GeneID:18354 MGI:1333750
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 54 transcript_id : NM_010997.1

name	Zfp354a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113374174 GeneID:21408 MGI:103172
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 354A transcript_id : NM_009329.3

name	LOC100040275 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261876 GeneID:100040275
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100040275 transcript_id : XM_001474403.1

name	5133400J02Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149261887 GeneID:71297 MGI:1918547
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 5133400J02 gene transcript_id : XM_001475111.1

name	LOC622699 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94390078 GeneID:622699
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 2 Proteins product : hypothetical LOC622699 transcript_id : XM_887141.2

name	BC049762 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802050 GeneID:193286 MGI:3039622
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC049762 transcript_id : NM_177567.3

name	Clk4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142373542 GeneID:12750 MGI:1098551
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CDC like kinase 4 transcript_id : NM_007714.3

name	Col23a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:23510252 GeneID:237759 MGI:2653243
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : procollagen, type XXIII, alpha 1 transcript_id : NM_153393.1

name	Agxt2l2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:28077014 GeneID:72947 MGI:1920197
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : alanine-glyoxylate aminotransferase 2-like 2 transcript_id : NM_028398.1

name	Hnrpab (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114326506 GeneID:15384 MGI:1330294
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : heterogeneous nuclear ribonucleoprotein A/B transcript_id : NM_010448.3

name	Nola2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142360258 GeneID:52530 MGI:1098547
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nucleolar protein family A, member 2 transcript_id : NM_026631.2

name	Rmnd5b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:28076878 GeneID:66089 MGI:1913339
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : required for meiotic nuclear division 5 homolog B (S. cerevisiae) transcript_id : NM_025346.1

name	C330016O10Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:56119137 GeneID:212706 MGI:2442218
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA C330016O10 gene transcript_id : NM_145974.3

name	0610009B22Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801968 GeneID:66050 MGI:1913300
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 0610009B22 gene transcript_id : NM_025319.2

name	Sec24a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116174773 GeneID:77371 MGI:1924621
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SEC24 related gene family, member A (S. cerevisiae) transcript_id : NM_175255.3

name	LOC100040402 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261878 GeneID:100040402
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : hypothetical protein LOC100040402 transcript_id : XM_001474628.1

name	Sar1b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21313475 GeneID:66397 MGI:1913647
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SAR1 gene homolog B (S. cerevisiae) transcript_id : NM_025535.1

name	Phf15 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892861 GeneID:76901 MGI:1924151
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : PHD finger protein 15 transcript_id : NM_199299.3

name	D11Ertd497e (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31542452 GeneID:52626 MGI:1261797
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DNA segment, Chr 11, ERATO Doi 497, expressed transcript_id : NM_029976.2

name	Ube2b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801975 GeneID:22210 MGI:102944
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ubiquitin-conjugating enzyme E2B, RAD6 homology (S. cerevisiae) transcript_id : NM_009458.3

name	Cdkl3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142362148 GeneID:213084 MGI:2388268
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cyclin-dependent kinase-like 3 transcript_id : NM_153785.3

name	LOC100040437 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261880 GeneID:100040437
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 13 ESTs product : hypothetical protein LOC100040437 transcript_id : XM_001474679.1

name	Ppp2ca (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142365556 GeneID:19052 MGI:1321159
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform transcript_id : NM_019411.3

name	Olfr1373 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46402204 GeneID:211472 MGI:3031207
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 1373 transcript_id : NM_207227.1

name	Sqstm1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754954 CCDS:CCDS24629.1 GeneID:18412 MGI:107931
definition	GO_component : GO:0005829 - cytosol [Evidence ISS]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0019901 - protein kinase binding [Evidence ISS]; GO:0042169 - SH2 domain binding [Evidence ISS]; GO:0003712 - transcription cofactor activity [Evidence TAS]; GO:0043130 - ubiquitin binding [Evidence ISS]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0016197 - endosome transport [Evidence ISS]; GO:0006955 - immune response [Evidence IEA]; GO:0007242 - intracellular signaling cascade [Evidence ISS]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence ISS]; GO:0008104 - protein localization [Evidence ISS]; GO:0043122 - regulation of I-kappaB kinase/NF-kappaB cascade [Evidence ISS]; GO:0006950 - response to stress [Evidence ISS] codon_start : 1 note : oxidative stress induced product : sequestosome 1 protein_id : NP_035148.1

name	Mgat4b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33239192 CCDS:CCDS24630.1 GeneID:103534 MGI:2143974
definition	GO_component : GO:0005615 - extracellular space [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005125 - cytokine activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA]; GO:0016758 - transferase activity, transferring hexosyl groups [Evidence IEA] GO_process : GO:0005975 - carbohydrate metabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation note : mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isoenzyme B product : N-acetylglucosaminyltransferase IVb protein_id : NP_666038.2

name	Ltc4s (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678734 CCDS:CCDS24631.1 GeneID:17001 MGI:107498
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008047 - enzyme activator activity [Evidence IEA]; GO:0004464 - leukotriene-C4 synthase activity [Evidence IEA]; GO:0016829 - lyase activity [Evidence IEA] GO_process : GO:0019370 - leukotriene biosynthesis [Evidence IEA]; GO:0006691 - leukotriene metabolism [Evidence IEA] codon_start : 1 product : leukotriene C4 synthase protein_id : NP_032547.1

name	Maml1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30425022 CCDS:CCDS24632.1 GeneID:103806 MGI:1890504
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IDA] GO_function : GO:0003713 - transcription coactivator activity [Evidence ISS] [Evidence IDA] GO_process : GO:0007219 - Notch signaling pathway [Evidence IDA]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence ISS] [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation product : mastermind like 1 protein_id : NP_780543.1

name	Canx (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6671664 CCDS:CCDS24633.1 GeneID:12330 MGI:88261
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence ISS] [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005529 - sugar binding [Evidence IEA] GO_process : GO:0006457 - protein folding [Evidence IEA] codon_start : 1 product : calnexin protein_id : NP_031623.1

name	1700121K02Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149261875 GeneID:76653 MGI:1923903
definition	codon_start : 1 product : hypothetical protein LOC76653 protein_id : XP_484016.3

name	Hnrph1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10946928 CCDS:CCDS24634.1 GeneID:59013 MGI:1891925
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] codon_start : 1 product : heterogeneous nuclear ribonucleoprotein H1 protein_id : NP_067485.1

name	Rufy1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369788 CCDS:CCDS24635.1 GeneID:216724 MGI:2429762
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005829 - cytosol [Evidence IDA]; GO:0005770 - late endosome [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008289 - lipid binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0008565 - protein transporter activity [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006897 - endocytosis [Evidence IEA]; GO:0015031 - protein transport [Evidence IDA]; GO:0030100 - regulation of endocytosis [Evidence IDA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : FYVE-finger containing protein; Rab4a interacting protein product : RUN and FYVE domain containing 1 protein_id : NP_766145.1

name	Adamts2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33563307 CCDS:CCDS24636.1 GeneID:216725 MGI:1347356
definition	GO_component : GO:0031012 - extracellular matrix [Evidence IDA]; GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0017074 - procollagen N-endopeptidase activity [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0030574 - collagen catabolism [Evidence IEA]; GO:0030199 - collagen fibril organization [Evidence IMP]; GO:0030324 - lung development [Evidence IMP]; GO:0006508 - proteolysis [Evidence IEA]; GO:0051605 - proteolysis during protein maturation [Evidence IMP]; GO:0043588 - skin development [Evidence IMP]; GO:0007283 - spermatogenesis [Evidence IMP] codon_start : 1 note : procollagen N-proteinase; a disintegrin and metalloproteinase with thrombospondin repeats product : a disintegrin-like and metalloprotease (reprolysin type) with thrombospondin type 1 motif, 2 protein_id : NP_783574.1

name	Zfp354c (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51592078 CCDS:CCDS24637.1 GeneID:30944 MGI:1353621
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : transcription factor 17-like 2 product : zinc finger protein 354C protein_id : NP_038950.3

name	9630041N07Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27734192 CCDS:CCDS24638.1 GeneID:214779 MGI:3053099
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 note : novel zinc finger protein product : hypothetical protein LOC214779 protein_id : NP_775563.1

name	Grm6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27734062 GeneID:108072 MGI:1351343
definition	GO_function : GO:0001642 - group III metabotropic glutamate receptor activity [Evidence TAS]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0007601 - visual perception [Evidence IMP] codon_start : 1 note : G protein-coupled receptor, family C, group 1, member F; G protein-coupled receptor GRM6; metabotropic glutamate receptor 6 product : glutamate receptor, metabotropic 6 protein_id : NP_775548.1

name	Zfp454 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982552 CCDS:CCDS24639.1 GeneID:237758 MGI:2679253
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 product : zinc finger protein 454 protein_id : NP_766382.2

name	Zfp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113374176 GeneID:22678 MGI:99167
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : zinc finger protein 2 protein_id : NP_001038162.1

name	Zfp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113374178 GeneID:22678 MGI:99167
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : zinc finger protein 2 protein_id : NP_001038163.1

name	Zfp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113374180 GeneID:22678 MGI:99167
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : zinc finger protein 2 protein_id : NP_001038164.1

name	Zfp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113374188 GeneID:22678 MGI:99167
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : zinc finger protein 2 protein_id : NP_001038165.1

name	Zfp354b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305545 CCDS:CCDS24641.1 GeneID:27274 MGI:1351476
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : transcription factor 17-like 1 product : zinc finger protein 354B protein_id : NP_038772.1

name	Prop1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679481 CCDS:CCDS24643.1 GeneID:19127 MGI:109330
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0001568 - blood vessel development [Evidence IMP]; GO:0009953 - dorsal/ventral pattern formation [Evidence IMP]; GO:0048732 - gland development [Evidence IMP]; GO:0043066 - negative regulation of apoptosis [Evidence IMP]; GO:0009887 - organ morphogenesis [Evidence IMP]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 note : prophet of Pit-1; Ames dwarf; pituitary specific homeodomain factor product : paired like homeodomain factor 1 protein_id : NP_032962.1

name	Olfr1378 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22129069 CCDS:CCDS24644.1 GeneID:258912 MGI:3031212
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : GA_x6K02T2QP88-4469162-4468215; olfactory receptor MOR129-2 product : olfactory receptor 1378 protein_id : NP_667121.1

name	Olfr1377 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22129071 CCDS:CCDS24645.1 GeneID:258913 MGI:3031211
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : GA_x6K02T2QP88-4453480-4452557; olfactory receptor MOR129-1 product : olfactory receptor 1377 protein_id : NP_667122.1

name	Olfr51 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:49170066 CCDS:CCDS24646.1 GeneID:18351 MGI:1333747
definition	GO_component : GO:0016021 - integral to membrane [Evidence ISS]; GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : GA_x6K02T2QP88-4431129-4430206; olfactory receptor MOR129-3 product : olfactory receptor 51 protein_id : NP_667120.1

name	Olfr54 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22203767 CCDS:CCDS24647.1 GeneID:18354 MGI:1333750
definition	GO_component : GO:0016021 - integral to membrane [Evidence ISS]; GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : GA_x6K02T2QP88-4411197-4410256; olfactory receptor MOR126-1 product : olfactory receptor 54 protein_id : NP_035127.1

name	Zfp354a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982823 CCDS:CCDS24648.1 GeneID:21408 MGI:103172
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : transcription factor 17 product : zinc finger protein 354A protein_id : NP_033355.2

name	LOC100040275 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261877 GeneID:100040275
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474453.1

name	5133400J02Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149261888 GeneID:71297 MGI:1918547
definition	codon_start : 1 product : hypothetical protein LOC71297 protein_id : XP_001475161.1

name	LOC622699 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94390079 GeneID:622699
definition	codon_start : 1 product : hypothetical protein protein_id : XP_892234.2

name	BC049762 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29243908 CCDS:CCDS24650.1 GeneID:193286 MGI:3039622
definition	codon_start : 1 product : hypothetical protein LOC193286 protein_id : NP_808235.1

name	Clk4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6671766 CCDS:CCDS24651.1 GeneID:12750 MGI:1098551
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IDA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0018108 - peptidyl-tyrosine phosphorylation [Evidence IDA]; GO:0046777 - protein amino acid autophosphorylation [Evidence IDA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 product : CDC like kinase 4 protein_id : NP_031740.1

name	Col23a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23510253 CCDS:CCDS24652.1 GeneID:237759 MGI:2653243
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006817 - phosphate transport [Evidence IEA] codon_start : 1 exception : mismatches in translation note : collagen type XXIII, alpha 1 product : procollagen, type XXIII, alpha 1 protein_id : NP_700442.1

name	Agxt2l2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28077015 CCDS:CCDS24653.1 GeneID:72947 MGI:1920197
definition	GO_function : GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : alanine-glyoxylate aminotransferase 2-like 2 protein_id : NP_082674.1

name	Hnrpab (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754222 CCDS:CCDS24654.1 GeneID:15384 MGI:1330294
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006396 - RNA processing [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; S1 protein D2 product : heterogeneous nuclear ribonucleoprotein A/B isoform 2 protein_id : NP_034578.1

name	Nola2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13386120 CCDS:CCDS24655.1 GeneID:52530 MGI:1098547
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA]; GO:0005732 - small nucleolar ribonucleoprotein complex [Evidence ISS] GO_function : GO:0003723 - RNA binding [Evidence IEA]; GO:0030559 - rRNA pseudouridylation guide activity [Evidence ISS]; GO:0030515 - snoRNA binding [Evidence ISS] GO_process : GO:0006365 - 35S primary transcript processing [Evidence ISS]; GO:0007046 - ribosome biogenesis [Evidence IEA]; GO:0042254 - ribosome biogenesis and assembly [Evidence IEA]; GO:0006364 - rRNA processing [Evidence IEA]; GO:0031118 - rRNA pseudouridine synthesis [Evidence ISS] codon_start : 1 note : H/ACA small nucleolar RNPs product : nucleolar protein family A, member 2 protein_id : NP_080907.1

name	Rmnd5b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28076879 CCDS:CCDS24656.1 GeneID:66089 MGI:1913339
definition	codon_start : 1 product : required for meiotic nuclear division 5 homolog B protein_id : NP_079622.1

name	C330016O10Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981859 CCDS:CCDS24657.1 GeneID:212706 MGI:2442218
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : Nedd4 binding protein 3 protein_id : NP_666086.2

name	0610009B22Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13384686 GeneID:66050 MGI:1913300
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005478 - intracellular transporter activity [Evidence IEA] codon_start : 1 product : hypothetical protein LOC66050 protein_id : NP_079595.1

name	Sec24a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116174774 CCDS:CCDS24660.1 GeneID:77371 MGI:1924621
definition	GO_component : GO:0030127 - COPII vesicle coat [Evidence IEA]; GO:0005783 - endoplasmic reticulum [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006888 - ER to Golgi vesicle-mediated transport [Evidence IEA]; GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : SEC24 related gene family, member A protein_id : NP_780464.2

name	LOC100040402 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261879 GeneID:100040402
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474678.1

name	Sar1b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313476 CCDS:CCDS24661.1 GeneID:66397 MGI:1913647
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0005622 - intracellular [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0006888 - ER to Golgi vesicle-mediated transport [Evidence IEA]; GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0007264 - small GTPase mediated signal transduction [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : SAR1a gene homolog 2 protein_id : NP_079811.1

name	Phf15 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84490377 CCDS:CCDS24662.1 GeneID:76901 MGI:1924151
definition	GO_function : GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 product : PHD finger protein 15 protein_id : NP_955003.2

name	D11Ertd497e (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313402 CCDS:CCDS24663.1 GeneID:52626 MGI:1261797
definition	codon_start : 1 product : hypothetical protein LOC52626 protein_id : NP_084252.1

name	Ube2b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560630 CCDS:CCDS24664.1 GeneID:22210 MGI:102944
definition	GO_component : GO:0000785 - chromatin [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0016874 - ligase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004840 - ubiquitin conjugating enzyme activity [Evidence IEA]; GO:0004842 - ubiquitin-protein ligase activity [Evidence IEA] GO_process : GO:0006281 - DNA repair [Evidence IEA]; GO:0006464 - protein modification [Evidence IEA]; GO:0006974 - response to DNA damage stimulus [Evidence IEA]; GO:0007288 - sperm axoneme assembly [Evidence IMP]; GO:0006512 - ubiquitin cycle [Evidence IEA]; GO:0006511 - ubiquitin-dependent protein catabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation product : ubiquitin-conjugating enzyme E2B, RAD6 homology protein_id : NP_033484.2

name	Cdkl3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83715988 CCDS:CCDS24665.1 GeneID:213084 MGI:2388268
definition	GO_function : GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 exception : mismatches in translation product : cyclin-dependent kinase-like 3 protein_id : NP_722480.2

name	LOC100040437 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261881 GeneID:100040437
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474729.1

name	Ppp2ca (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9506983 CCDS:CCDS24666.1 GeneID:19052 MGI:1321159
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005829 - cytosol [Evidence ISS] [Evidence IDA]; GO:0015630 - microtubule cytoskeleton [Evidence ISS]; GO:0005739 - mitochondrion [Evidence ISS]; GO:0005634 - nucleus [Evidence ISS]; GO:0005886 - plasma membrane [Evidence IDA]; GO:0000159 - protein phosphatase type 2A complex [Evidence ISS]; GO:0005625 - soluble fraction [Evidence ISS] GO_function : GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004721 - phosphoprotein phosphatase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0046982 - protein heterodimerization activity [Evidence ISS]; GO:0000158 - protein phosphatase type 2A activity [Evidence TAS] GO_process : GO:0006672 - ceramide metabolism [Evidence ISS]; GO:0000188 - inactivation of MAPK activity [Evidence ISS]; GO:0006917 - induction of apoptosis [Evidence ISS]; GO:0007498 - mesoderm development [Evidence IMP]; GO:0030308 - negative regulation of cell growth [Evidence ISS]; GO:0042518 - negative regulation of tyrosine phosphorylation of Stat3 protein [Evidence ISS]; GO:0006470 - protein amino acid dephosphorylation [Evidence TAS] [Evidence ISS]; GO:0030155 - regulation of cell adhesion [Evidence ISS]; GO:0045595 - regulation of cell differentiation [Evidence ISS]; GO:0006275 - regulation of DNA replication [Evidence ISS]; GO:0040008 - regulation of growth [Evidence ISS]; GO:0000074 - regulation of progression through cell cycle [Evidence ISS] [Evidence TAS]; GO:0045449 - regulation of transcription [Evidence ISS]; GO:0006445 - regulation of translation [Evidence ISS]; GO:0030111 - regulation of Wnt receptor signaling pathway [Evidence ISS]; GO:0010033 - response to organic substance [Evidence ISS]; GO:0008380 - RNA splicing [Evidence ISS]; GO:0019932 - second-messenger-mediated signaling [Evidence ISS] codon_start : 1 product : protein phosphatase 2a, catalytic subunit, alpha isoform protein_id : NP_062284.1

name	Olfr1373 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46402205 CCDS:CCDS24667.1 GeneID:211472 MGI:3031207
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : MOR256-69_p; olfactory receptor GA_x6K02T2QP88-3283154-3284089 product : olfactory receptor 1373 protein_id : NP_997110.1

name	D930048N14Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149261892 GeneID:97775 MGI:2144709
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 26 ESTs product : RIKEN cDNA D930048N14 gene transcript_id : XR_035265.1

clone name	MSMg01-312I04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-321C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-319D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-087O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-048F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-048A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358O21
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-122B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-446M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-128P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-172C09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-189I02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388O19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-465B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-205F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-302J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-234N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502O01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354C13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-398O07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-362B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-443E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-497F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-278E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-332D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-441I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-275E15
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-424O22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-045O02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-185E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291F08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-172G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-218A07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-424A04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-105B13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-386E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-123L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-113G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-315F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489M21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-263H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-520H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-057K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-436E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-299H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-180L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-143G24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-076G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101K23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-181N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-157P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438E15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-208N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-048J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-530F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-128M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-341P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-115G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157M07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-093F16
singlet/doublet	singlet
plural/unique	plural

clone name	B6Ng01-270L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142G06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-106C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-350P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071C03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-250M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013K16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297O21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029C07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-314M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280G06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308J07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195D04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083F13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-348D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329O21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247D02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106G01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-286D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044M13
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-123L24.T7 (MSMg01no123_l24.b1)	MSMg01-123L24.TJ (MSMg01no123_l24.g1)
ACC	AG333276	AG333277
length	1,271	1,360
length of high quality (start - end)	279 (130 - 408)	---
definition	CHROMAT_FILE: MSMg01no123_l24.b1 PHD_FILE: MSMg01no123_l24.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 18:33:54 2005	CHROMAT_FILE: MSMg01no123_l24.g1 PHD_FILE: MSMg01no123_l24.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 18:33:54 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	NCCAAGAGTCTNNNGCACATTGCGCGCTAAGACTCCTAAGGGAGAGGATC CGCGGAATTNCAGAAAGGCTTTTCCGCATTAAAGACGTCCTACATTTCTC GGAACAATAGGCATACCCCTTAAACATTCAAAAACCTCTCACAACCATCC TAAAATTAACACATTTAAAAGGAGAAGATACAACAGCTAGTTTACCAAAA GGATACCTTCAAATTGATGCGTTTATAAGCGATATTTAAGCTTTTAAAAT GCCCAGGGAAACCACTCTAAAATAAGGTGGGATGTGAAGCATATAGACTT TTATTAAAAACTGTAAGATTTTGAATTTGTTTTTAAATGTTGGCCTAGAA CAAGAATAGTGGAAAGAAACTCTGGCCCTTGGAAACAGATGAAATGCCTG ACCCATGGAATCCTAAGTGCCTGACCACCATACCCCCAGCCCAAGCTTCT GCCTCCTGGCTTGTTTATTCCCCCTGGACAGAAGCATCCCCTTCAAGAGA AAGATGGGTCTGTGAGACCCACCAGGTAAACAAATTTCACATGTCTACCA AACCCAAACACAACATCACCAGGTTCTTTCTCCGGGTTATGGGCGCTGTA AAGAACTGCTAGGGAGGCGACTGGCAGACAACGGGAGGAAAGGAGTCTCC TTCGTGCCCAGCTTCCCGCAAGGGCTCCAGGTTTGCAGCTCTCGTCCATC GCCACCCATGTTCCCTTAGGCCTCTCCAGCGATACGCTGCTTTGACCCCC CCATGCAATCCTCTGTCAACCACCCCCCCCAACAACACTCCCCGGTTATA CCCCCGCCGCGCCGCGCCCCCCCCCCTCCAATCCCTAACACCTGGCCCAG CTCCAAATCTCCGCCCCACTTCCGGACATCTCCCCCCCCTCCCTGGCTCC CACCAAGCTGATCCCCCCCGCCACCACCCCCTCGGCTCTATACCCCATTA CCCCCCCGCGCTTTCCATATCATTTCACCTACAGCGTTACGCTACCGCCC CGTCACCCACCCCTACCCTCCCCTTCCTCTCCCTCCCGCGTCCTCCCACC TTCTCCCTCCTCCTCTCTCTCTCCGCTCCTCCCCCCCCCCTCCTTCCACC TTCTCCCTTCCATCTCCCCCTCTCCCATCCTACCACCATCTCTCTTTCCT CTCCCTCTCTCTCCACCATCGCACCATCCTCCTCCTTCTTCTCCTTCCCC TCCTTCTCCTTCCACTCGTCTCTCTCTCCTTCCTGCTTCCTCTCTCATCT ATCTCCTCCTCTCTCTTCACC	TGGATCCTTTTAATCGATGGTAGCTGGGGXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXCATTTCTTGAAACGTGTGCAGTGACAGAT ACTCCACGTTTGAATCTATTACCACCGCTAACGCAGTAGGAGCAAAGGTG GCCCCCAGGCTGGAAACCTCCACTTCCAGGGAGGCCCCAATGGTTAAGCT GAAGCTTCCAGCCGTTATTCTTCCCAAACAAGATTTGCAGATTGCCAGCA GGCTGTGTGCTTGCCCAGAGAGTCAAACCTTTCAGACATCTTTGTTGCAG GTACCAAGTATTCTCTGAAGAGCTCTGGTCACAAGGAGCTTCCCGGTCCC TCCTCCCTCAAGCTGGCCCCTGGAGGAAATCCCTGGCCAGGGGGGGCTGG GGGGTTGCCTCTTTTTTCCCCCCCCCCCTCCCTCCCCCTCCTTTCTCTCC ATCCTCCCCCTTTTTTTTTTTTCTCCCCCCCCCATCTCCCCCCCCCCCCC CCCCAACAAAAAAAGGGGGGTCTTCTTTTCCCTCCCTTCTTCCCCCCTCT TTTCTTTTTTTTTTCTTTCTCTTCTCCTTTCCCTCTCTCTCCCTCCTCCT CCCTCCCTTCCCCCCTCTCACTCCCCTCCCTCCTCCCCCCCCCCCCCCCC CCCCCCCCCCCCCTCTCCCCCTCCCCTCCTCCCCCCCTCCCCCCCTCCCC CCCTCCCCCCCCTCCCCCTCCCTCCTCCCCCCCTCCCCCCCCCCACCTCC CCCCCCCCCCCCCCCCCCCCCCCTCTCTCCCTCCCCCTCCCCCCTCCTCC TCCCCCCCCCCCTCCCCCCCCTCTCCCCCCCTTTCCCCCTCCCCCCCCCC CCCCCCTCTCCCCTCCTCTTCTCCCCCCCTCCCCCCTCCCCCCTCCCCTT ATTCCCCCCCTCCCTCCCTCCCCCCTCCCCCCTCTCTCCCCCTCTCCCTC CCCTCCCTCCCCTCCCGCCCCCTCACATCTCCCCCCCCCCCCCCCCCCCC CCTCCTCCTCCCTCCCCCCCCCCTCCCTTCCCTCCCCCCCCCCTCCCTCT CCTCCCCTCCCCTCTTTCCCCCCCCCCCCCTTCCTCCCCCTCTCTCTCCC TCCCCCCCCCCCGCTGTCCCCTCCCCCCTCCCTCCCCCCCCTCCCCCCCC ACCCCCCCCCACCCCTCCTCCCTCCCCCTCCTCCTCCTCTCTCCTCTCTC CACCCCCTCTCCCCTCCTTCCCATCCCCCCCTCCCCCCCCCTTCCCTCCC TCTGCCTCCCTCTACTCCCCCTCCTTTCCCCCCTCTCCTCCCTCCCGCCC CCACTCCTCCCCCCTCCCCCCTTCCTCCCTCTCTCCCCTCCCTCACCCTC CCTTTCCCTC
quality values	Open. Hide. 0 3 6 6 6 6 8 8 9 11 3 0 0 0 3 10 10 7 8 8 8 8 8 8 8 8 8 8 8 8 8 12 15 8 8 8 8 8 12 12 24 25 28 28 28 28 24 22 25 30 37 28 24 24 24 17 18 9 3 0 3 9 13 22 37 37 40 40 40 47 23 23 9 9 7 7 7 8 9 9 10 8 6 6 6 6 8 10 10 21 23 31 31 31 33 33 37 37 39 57 57 57 53 53 53 53 53 44 44 39 50 37 37 23 23 12 11 9 9 9 9 13 10 12 6 6 8 8 10 10 18 23 37 48 37 39 36 33 33 32 33 37 59 59 57 57 57 57 43 39 43 43 48 48 50 50 50 68 50 50 50 50 48 48 48 48 54 54 54 54 59 59 59 59 59 57 57 57 44 44 35 35 35 42 42 44 39 37 37 28 28 28 37 42 57 57 57 57 57 59 57 59 48 48 47 57 47 44 44 50 50 54 57 59 59 59 54 50 47 43 35 32 32 35 44 43 52 52 52 43 52 52 43 43 37 37 37 42 37 52 59 52 52 52 52 52 57 57 54 57 57 59 57 52 52 52 52 57 57 57 57 57 52 57 52 57 52 43 43 42 42 57 43 39 43 43 27 21 38 24 24 23 32 36 43 43 57 50 52 52 52 43 43 38 23 23 23 43 43 52 57 57 54 52 52 52 52 52 57 57 59 59 43 43 27 28 28 44 33 33 33 43 43 43 37 37 32 32 27 27 33 36 36 43 47 47 42 42 28 33 28 30 36 37 36 36 35 31 31 37 37 37 43 37 39 35 30 37 31 35 35 39 32 39 37 37 37 43 43 43 43 43 43 43 43 43 37 33 30 30 30 37 40 43 43 43 37 37 28 28 28 33 33 30 33 39 47 43 36 36 43 43 40 41 34 32 21 13 11 11 11 11 11 11 12 12 12 17 27 29 26 36 36 43 43 43 43 39 39 35 35 37 39 47 47 57 39 40 42 47 47 47 43 40 37 28 28 32 32 28 23 25 18 11 11 12 15 12 10 10 10 10 13 15 12 12 15 12 11 8 11 10 10 8 10 12 21 21 30 32 36 33 24 28 20 20 20 32 30 34 28 28 20 15 12 8 8 8 8 10 13 11 11 9 9 11 20 15 15 15 28 26 24 24 15 15 14 24 24 15 14 14 15 25 21 12 11 11 15 21 18 20 20 20 20 20 22 18 18 13 13 13 10 10 11 10 10 10 9 12 12 10 11 9 9 9 10 15 15 11 11 10 10 23 21 21 12 11 11 19 19 19 16 9 9 9 9 9 19 24 30 26 28 19 13 9 14 14 19 25 18 11 10 9 10 15 10 9 10 12 16 16 28 23 25 12 11 11 12 12 11 18 15 18 14 11 10 9 9 12 10 10 10 8 8 8 8 8 12 12 11 12 12 15 17 19 18 18 11 12 12 19 20 12 11 9 10 8 8 8 10 8 12 13 11 17 21 24 22 18 19 17 10 11 8 8 8 8 18 18 17 19 12 12 11 11 16 12 9 12 8 8 8 10 19 11 12 13 9 9 11 11 11 17 15 16 11 12 12 10 10 10 10 13 16 12 8 8 8 8 10 8 8 8 8 10 10 9 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 10 10 10 10 10 12 12 14 14 16 14 22 19 26 17 10 8 7 7 8 8 8 8 6 6 8 8 8 8 8 8 8 9 9 9 19 21 19 14 9 6 8 8 11 11 11 11 11 11 12 13 16 15 13 8 10 8 8 10 11 10 10 10 12 10 10 9 9 8 10 11 8 8 8 12 12 11 10 10 10 17 13 10 10 10 10 8 11 8 6 8 8 10 8 8 7 7 8 6 8 8 8 8 8 8 8 6 6 6 8 8 8 8 10 10 8 8 6 7 8 10 10 8 8 6 6 10 8 8 9 10 10 10 10 11 10 8 8 8 6 8 8 6 6 8 8 10 10 10 13 13 14 14 12 11 9 9 8 8 8 9 9 9 10 8 8 7 6 8 8 8 6 6 8 6 6 6 7 11 17 10 10 10 17 19 10 10 9 10 10 15 12 11 6 6 6 6 8 8 7 7 8 8 8 10 10 11 11 8 8 8 8 8 8 10 12 12 12 13 10 10 6 6 8 8 11 8 8 8 8 8 8 8 8 6 6 8 8 8 8 8 8 8 8 8 8 8 8 8 8 12 10 10 9 10 9 9 9 9 8 8 10 10 9 9 11 11 10 10 10 10 10 13 12 11 8 8 8 8 8 8 10 14 19 19 15 13 9 9 8 8 8 6 6 8 10 13 16 10 9 9 9 9 9 8 8 8 8 8 8 8 8 10 8 8 8 8 8 8 11 13 10 10 11 10 10 10 12 12 10 10 8 8 10 8 8 8 6 6 8 8 8 8 11 11 13 18 28 25 19 15 15 10 10 10 11 11 9 8 8 8 8 8 8 8 7 6 8 8 10 8 8 8 8 8 10 9 9 7 10 8 6 6 6 8 8 8 8 9 11 10 8 8 6 6 7 7 6 8 8 8 8 7 6 8 7 8 8 6 8 9 9 8 8 7 7 12 13 10 10 10 13 8 8 8 8 6 6 8 7 6 8 6 6 6 6 8 8 10 8 8 8 8 12 13 12 12 9 6 6 8 8 8 8 8 9 12 10 10 11 8 8 8 8 8 10 8 8 8 8 8 8 8 8 8 9 9 9 8 6 6 6 6 8 8 15 13 9 9 12 10 8 10 10 11 8 6 6 6 6 8 8 11 11 11 10 8 12 8 8 6 11 6 6 6 6 6 8 10 10 12 9 9 10 10 10 10 8 8 6 6 8 8 6	Open. Hide. 6 6 8 6 9 9 9 9 9 19 8 9 7 8 9 9 8 6 8 6 6 6 8 8 6 6 7 7 13 11 11 8 11 7 9 11 21 19 19 12 9 9 10 19 19 29 10 10 10 21 21 37 23 23 11 16 12 19 22 33 38 38 36 53 41 43 37 19 18 10 10 10 10 9 8 10 10 6 7 6 6 8 8 9 9 10 10 13 19 19 24 24 22 15 21 10 13 14 30 27 35 24 21 12 12 11 18 19 24 29 26 26 13 11 10 10 10 9 9 9 9 10 10 15 13 10 9 9 9 9 19 22 37 23 16 10 10 10 10 23 27 28 13 13 30 33 41 30 30 30 23 17 11 11 11 11 11 27 27 32 30 33 35 39 25 17 10 9 9 14 9 10 10 15 15 14 12 12 25 25 35 35 39 37 23 18 11 11 11 11 12 12 12 12 27 21 15 16 10 13 14 16 19 23 24 17 17 15 11 11 16 20 11 11 11 23 25 27 28 13 13 13 25 24 28 28 22 36 28 28 28 36 32 40 33 19 15 8 8 8 12 28 37 37 32 24 17 18 18 18 18 20 24 28 23 23 22 22 22 31 31 39 34 30 22 17 13 25 24 31 28 21 21 15 12 10 10 10 10 12 10 18 13 18 18 31 32 28 35 39 39 32 32 20 20 14 19 18 15 15 12 12 10 17 16 13 13 19 19 25 23 23 13 13 13 27 27 40 25 25 21 28 21 25 28 28 28 24 24 15 19 10 14 19 30 30 33 28 28 32 22 21 14 12 12 25 28 30 32 32 35 29 30 15 10 9 9 9 14 13 25 29 33 33 33 43 33 31 33 29 19 13 9 9 9 15 23 23 15 15 15 27 18 19 14 11 11 11 11 11 11 12 14 15 8 8 10 8 8 9 12 19 15 12 11 12 15 11 11 11 11 11 19 17 10 10 10 8 8 8 8 15 15 17 11 9 13 8 8 8 8 7 8 8 9 10 7 8 8 8 7 8 8 8 6 6 8 8 8 8 8 8 10 12 10 12 12 8 8 10 8 9 9 10 13 14 24 24 24 27 14 9 8 8 10 19 19 20 16 13 8 8 8 8 8 10 10 10 10 10 15 13 18 17 17 12 15 17 18 30 23 22 15 11 9 9 10 9 11 11 13 11 11 14 13 10 10 6 6 6 6 8 8 9 13 13 8 13 10 8 8 8 7 7 12 9 9 10 8 10 9 10 12 7 7 6 6 8 10 10 13 13 9 8 8 8 8 11 13 12 8 8 8 8 11 10 10 9 8 8 8 8 8 12 10 10 10 10 11 11 8 8 8 8 8 10 10 8 8 8 8 9 8 8 8 8 8 8 8 8 8 12 13 12 8 8 6 6 8 8 9 9 9 11 10 10 8 8 8 6 6 6 8 8 8 8 8 8 8 9 11 8 10 7 7 8 8 9 10 10 14 22 20 24 22 22 22 21 22 15 10 8 8 10 8 10 10 9 10 9 12 12 10 10 8 7 7 10 8 9 9 9 9 15 13 10 10 10 9 9 9 10 11 11 8 8 12 12 13 21 16 15 17 19 16 20 14 16 14 10 10 10 10 10 10 10 10 9 8 8 8 8 9 9 10 10 8 8 6 6 10 8 8 8 8 8 9 13 13 12 10 10 9 7 12 10 12 10 15 13 19 15 10 8 7 7 8 8 8 13 9 10 13 18 15 13 10 10 10 10 10 9 12 13 13 9 9 9 9 9 12 13 10 11 8 8 6 7 10 13 9 9 10 15 13 10 10 9 10 10 11 8 8 8 7 7 9 8 8 8 8 8 8 10 10 8 8 15 15 17 16 10 10 9 10 10 10 11 9 13 10 10 9 9 8 15 13 10 16 19 18 11 11 10 10 15 13 12 8 10 8 12 12 23 24 20 22 16 12 16 11 11 14 12 11 6 6 8 8 9 8 8 8 8 8 6 6 8 8 8 10 13 8 8 8 8 8 8 8 8 8 9 10 10 13 13 15 18 15 12 10 8 8 6 6 10 15 10 10 8 8 8 8 8 8 10 19 19 13 8 8 10 13 8 11 8 11 11 9 9 10 10 12 8 7 9 10 13 15 9 8 9 10 10 10 8 10 8 13 11 10 8 6 8 10 10 11 11 12 10 10 11 10 10 10 14 10 10 15 19 11 11 8 8 13 6 6 8 8 9 9 10 10 8 8 8 8 10 10 8 8 8 12 12 12 12 19 24 18 18 15 22 19 12 11 13 15 13 20 11 13 12 10 10 7 6 8 8 10 9 9 9 9 10 10 10 10 10 10 10 13 13 8 8 8 10 16 17 8 8 7 6 6 8 10 8 8 8 8 8 13 10 8 8 8 8 10 10 8 8 8 8 8 8 8 18 12 15 15 8 8 6 6 8 8 10 9 9 9 11 11 13 14 10 11 12 8 15 10 10 9 8 8 8 8 8 11 8 8 8 8 8 8 9 10 8 8 8 8 8 8 8 8 10 15 15 14 14 13 15 13 6 6 8 6 6 8 8 8 8 8 8 8 8 10 10 10 13 13 10 10 11 10 9 9 13 10 18 10 8 8 11 10 8 10 10 15 13 13 6 6 6 10 10 16 16 18 14 18 11 10 9 13 9 9 9 10 12 12 12 8 8 10 10 10 10 10 13 6 6 8 8 8 8 8 6 8 6 6 8 8 8 8 8 8 12 8 8 8 10 8 8 8 8 10 13 7 7 7 7 10 11 11 11 8 10 10 10 9 9 9 9 9 9 10 22 23 24 19 19 22 21 16 15 15 15 19 16 8 8 8 8 10 8 13 12 14 10 10 8 8 8 6 9 9 10 9 9 15 9 9 9 9 8 8 6 6 8 8 13 10 10 13 10 8 8 8 8 13 15 16 13 8 8 8 8 15 8 9 10 12 12 7 7 10 8 6 7 8 12 8 8 6 6 7 7 10 8 10 10 10 10 10 8 6 6 10 10 7 7 6 6 8 10 6 6 8 8 6 7 6 6 8 10 10 13 15 11 11 8 8 10 14 8 8 8 13 8 9 9 13 12 12 12 12 12 8 8 8 6

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no123_l24.b1 MSMg01no123_l24.b1 CHROMAT_FILE:
MSMg01no123_l24.b1 PHD_FILE: MSMg01no123_l24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:33:54 2005
         (279 letters)



>mm_chr11_51014476_51015154
          Length = 679

 Score =  524 bits (271), Expect = e-153
 Identities = 277/279 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaaaacctctcacaaccatcctaaaattaacacatttaaaaggagaagatacaacagcta 60
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 201 aaaaacctctcccaaccatcctaaaattaacacatttaaaaggagaagatacaacagtta 260

                                                                       
Query: 61  gtttaccaaaaggataccttcaaattgatgcgtttataagcgatatttaagcttttaaaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtttaccaaaaggataccttcaaattgatgcgtttataagcgatatttaagcttttaaaa 320

                                                                       
Query: 121 tgcccagggaaaccactctaaaataaggtgggatgtgaagcatatagacttttattaaaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgcccagggaaaccactctaaaataaggtgggatgtgaagcatatagacttttattaaaa 380

                                                                       
Query: 181 actgtaagattttgaatttgtttttaaatgttggcctagaacaagaatagtggaaagaaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 actgtaagattttgaatttgtttttaaatgttggcctagaacaagaatagtggaaagaaa 440

                                                  
Query: 241 ctctggcccttggaaacagatgaaatgcctgacccatgg 279
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctctggcccttggaaacagatgaaatgcctgacccatgg 479


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 279
Length of database: 679
Length adjustment: 9
Effective length of query: 270
Effective length of database: 670
Effective search space:   180900
Effective search space used:   180900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information