Query= MSMg01no124_b11.b1 MSMg01no124_b11.b1 CHROMAT_FILE:
MSMg01no124_b11.b1 PHD_FILE: MSMg01no124_b11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:34:43 2005
(330 letters)
>mm_chr11_24530565_24531294
Length = 730
Score = 623 bits (322), Expect = 0.0
Identities = 328/330 (99%)
Strand = Plus / Minus
Query: 1 tggggttcttctttctatccaacttatctctgaagcttgtctcagctgggattggcagat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 tggggttcttctttctatccaacttatctctgaagcttgtctcagctgggattggcagat 471
Query: 61 ttggatttgcttcaatctctgacagacgcaaactttcaacatttttatcccatgcacagt 120
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 470 ttggatttgcttcaatctctgacagacgcaaactttcaatatttttatcccatgcacagt 411
Query: 121 gaggtacgatgtaaaactggttaacaaagaatagctcacatctaaaagaatcaagattag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 gaggtacgatgtaaaactggttaacaaagaatagctcacatctaaaagaatcaagattag 351
Query: 181 aatctttgacccagggaagaagcagggcaggggataagctggcagatcaatgtaaggttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 aatctttgacccagggaagaagcagggcaggggataagctggcagatcaatgtaaggttc 291
Query: 241 cccagggtttgagcccaaccttactcctgagactgacctgtcaggaaaggatggagtgct 300
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 290 cccagggtttgagcccaaccttactcctgagactgacctgccaggaaaggatggagtgct 231
Query: 301 ctaggacaccaaggaaagtgaggtcagcac 330
||||||||||||||||||||||||||||||
Sbjct: 230 ctaggacaccaaggaaagtgaggtcagcac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 330
Length of database: 730
Length adjustment: 9
Effective length of query: 321
Effective length of database: 721
Effective search space: 231441
Effective search space used: 231441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no124_b11.g1 MSMg01no124_b11.g1 CHROMAT_FILE:
MSMg01no124_b11.g1 PHD_FILE: MSMg01no124_b11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:34:43 2005
(333 letters)
>mm_chr11_24399870_24400604
Length = 735
Score = 536 bits (277), Expect = e-157
Identities = 318/337 (94%), Gaps = 11/337 (3%)
Strand = Plus / Plus
Query: 1 ttttattatgctcttttataagtgaagacattaaaatacagagtgaatgaattatttacg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttttattatgctcttttataagtgaagacattaaaatacagagtgaatgaattatttacg 260
Query: 61 tggttcctggtagaggtgatattcacaacaaatctatgaatctttctggactcagtttta 120
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggtaagtggtagaggtgatattcacaacaaatctatgaatctttctggactcagtttta 320
Query: 121 tatgctccctacagtcatacctgagtaagaaattaggctctgatatgccgtgcctgtcag 180
||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 321 tatgccccctacagtcatacctgagtaagaaattaggctctgatatgccctgcctgtcag 380
Query: 181 ccctgaggatctgaggccacatatggtaa--gacatagatatataggtacaaatccatct 238
||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||| |
Sbjct: 381 ccctgaggatctgaggccacatacgttaaaagacatagatatataggtacaaatccatat 440
Query: 239 tctacccttgaacaagggtacccacttatctcttttagaagatgtgtttggggaaagagt 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctacccttgaacaagggtacccacttatctcttttagaagatgtgtttggggaaagagt 500
Query: 299 tgaatgataatcaaatgg--ctactgtataaggcatc 333
|||||||| ||| |||||||||||||||||
Sbjct: 501 tgaatgat-------tggggctactgtataaggcatc 530
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 333
Length of database: 735
Length adjustment: 9
Effective length of query: 324
Effective length of database: 726
Effective search space: 235224
Effective search space used: 235224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
