Query= MSMg01no124_h08.b1 MSMg01no124_h08.b1 CHROMAT_FILE:
MSMg01no124_h08.b1 PHD_FILE: MSMg01no124_h08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:35:35 2005
(277 letters)
>mm_chr11_8396280_8396956
Length = 677
Score = 485 bits (251), Expect = e-142
Identities = 269/275 (97%)
Strand = Plus / Plus
Query: 1 tgcttgtgagagacgtttttagctggtaagctctattactatccccaagtgaaagaaacc 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 201 tgcttgtgagagacgtttttagctggtgagctctattactatccccaagtgaaagaaacc 260
Query: 61 ccaaaatgatagcagacacacgggaaaaatggcagcacctaggagcctaatctcagtcag 120
|||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||
Sbjct: 261 ggaaaatgatagcagacacacgggaaaaatggcagcacctaggagcctgatctcagccag 320
Query: 121 tccagttctgagcccccaagaggttctcataaatccacatagctcagacaggcaaccctc 180
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tccaattctgagcccccaagaggttctcataaatccacatagctcagacaggcaaccctc 380
Query: 181 aacaagaactggagacatcccctgaactatgcaattccaattgcatgcatagctagctct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aacaagaactggagacatcccctgaactatgcaattccaattgcatgcatagctagctct 440
Query: 241 caacctcagaaaacgtccaagaaatctacaccgaa 275
|||||||||||||||||||||||||||||||||||
Sbjct: 441 caacctcagaaaacgtccaagaaatctacaccgaa 475
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 277
Length of database: 677
Length adjustment: 9
Effective length of query: 268
Effective length of database: 668
Effective search space: 179024
Effective search space used: 179024
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no124_h08.g1 MSMg01no124_h08.g1 CHROMAT_FILE:
MSMg01no124_h08.g1 PHD_FILE: MSMg01no124_h08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:35:35 2005
(277 letters)
>mm_chr11_8558351_8559027
Length = 677
Score = 478 bits (247), Expect = e-139
Identities = 268/275 (97%)
Strand = Plus / Minus
Query: 1 tggtttgaaggtgttgtaagacccccctgcctgggaggagacacttagcattttcccacg 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 475 tggtttgaaggtgttgtaagacccccctgcctgggaggagacacttagcattttcccaag 416
Query: 61 ctacaatgagggcaggtttccacaaggagatcagaatgataaatggcttcatcccagtga 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 415 ctacaatgagggcaggtttccacagggagatcagaatgataaatggcttcatcccagtga 356
Query: 121 tagggacagatgtgttcagtttgactcctgtgaaaacacctatagagtcaggtgctcagg 180
||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 355 tagggacaggtgtgttcagtttgacgcctgtgaaaacacctatagagtcaggtgctcagg 296
Query: 181 ggtggaggaaaggcaggcttcatagataggtggttcacatatgggtgggggctgggctgg 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 295 ggtggaggaaaggcaggcttcatagataggtggttcacatatgggtgggggctgggttgg 236
Query: 241 cactcgagggctgtttgggaatgtgttttcaaatc 275
| |||| ||||||||||||||||||||||||||||
Sbjct: 235 cgctcgggggctgtttgggaatgtgttttcaaatc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 277
Length of database: 677
Length adjustment: 9
Effective length of query: 268
Effective length of database: 668
Effective search space: 179024
Effective search space used: 179024
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
