Query= MSMg01no124_l01.b1 MSMg01no124_l01.b1 CHROMAT_FILE:
MSMg01no124_l01.b1 PHD_FILE: MSMg01no124_l01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:36:07 2005
(519 letters)
>mm_chr11_60140970_60141889
Length = 920
Score = 913 bits (472), Expect = 0.0
Identities = 508/520 (97%), Gaps = 1/520 (0%)
Strand = Plus / Minus
Query: 1 gaaaagctgggtgtgtgaggtgactgcagtctgttgaggggcactgttcattgacttgcc 60
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 720 gaaaagctgggtgtgtgaggtgactgcagtctgttgaggggcgctgttcattgacttgca 661
Query: 61 gcgcttcaaggcaggtttcacatgggtctgagttatgtgaataggtctcccagaaagtag 120
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 660 gcgcttcaaggcaggtttcaaatgggtctgagttatgtgaataggtctcccagaaagtag 601
Query: 121 gtgacagtcagagaacagacatgagtccacatctgcccatgctgaagacagtaccttgct 180
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 600 gtgacagtcagagaacagacatgagtccacatctgcctatgctgaagacagtaccttgct 541
Query: 181 cagtagggctccgggatctggagactccatctactatggtttgcatacagttgtcacatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 cagtagggctccgggatctggagactccatctactatggtttgcatacagttgtcacatg 481
Query: 241 ccccccaaggcttcataggctaatattcggtccctatttttaggtattaagctagtggaa 300
||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||
Sbjct: 480 ccccccaaggcttcacaggctaatattcggtccctattccgaggtattaagctagtggaa 421
Query: 301 acttattctaatggttgtttagaaggggtgcctttggg-ggtatttagggttaggtaagt 359
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 420 acttattctaatggttgtttagaaggggtgcctttgggaggtatttagggttaggtaagt 361
Query: 360 tggagctcccgtgactgaaccctggggtggtcataagaagtggggtatttaataagaaaa 419
|||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 360 tggaactcccgtgactgaaccctggggtagtcataagaagtggggtatttaataagaaaa 301
Query: 420 gactagaagagatgaacactgatagacccactttcctgttctttgtgattcatgtgatta 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 gactagaagagatgaacactgatagacccactttcctgttctttgtgattcatgtgatta 241
Query: 480 tcttgtgtttctctgagccttctgcctgcaaaaggctgta 519
||||||||||||||| ||||||||||||||||||||||||
Sbjct: 240 tcttgtgtttctctgggccttctgcctgcaaaaggctgta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 519
Length of database: 920
Length adjustment: 10
Effective length of query: 509
Effective length of database: 910
Effective search space: 463190
Effective search space used: 463190
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no124_l01.g1 MSMg01no124_l01.g1 CHROMAT_FILE:
MSMg01no124_l01.g1 PHD_FILE: MSMg01no124_l01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:36:07 2005
(274 letters)
>mm_chr11_59968184_59968857
Length = 674
Score = 503 bits (260), Expect = e-147
Identities = 269/272 (98%)
Strand = Plus / Plus
Query: 1 taaaaagctgtgcctgttgggaccagggaaggaggcctggtggacagtgctattttgtct 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 201 taaaaagctgtgcctgttgggaccagggaaggaggcctggtggacagtgctattttgtgt 260
Query: 61 ttgtttctgacctctaccctgttgcctacccacgcagcaaaccctgggacagatcctgtc 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 261 ttgtttctgacctctaccctgttgcctaccaacgcagcaaaccctgggacagatcctgtc 320
Query: 121 ttattttctccagaacaaagcaggctaaagccagggcttcagtgagaggaggtaaaagaa 180
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 321 ttattttctccagaacaaagcaggctaaagccaaggcttcagtgagaggaggtaaaagaa 380
Query: 181 accaaagcttgccttttgtcccccaagaaagcatctagggaaacggatttgtccttgaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 accaaagcttgccttttgtcccccaagaaagcatctagggaaacggatttgtccttgaac 440
Query: 241 cgtaatgggaggccttcaggagatgtgaaggg 272
||||||||||||||||||||||||||||||||
Sbjct: 441 cgtaatgggaggccttcaggagatgtgaaggg 472
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 274
Length of database: 674
Length adjustment: 9
Effective length of query: 265
Effective length of database: 665
Effective search space: 176225
Effective search space used: 176225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
