Query= MSMg01no125_a22.b1 MSMg01no125_a22.b1 CHROMAT_FILE:
MSMg01no125_a22.b1 PHD_FILE: MSMg01no125_a22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:36:58 2005
(627 letters)
>mm_chr11_76351094_76352119
Length = 1026
Score = 905 bits (468), Expect = 0.0
Identities = 489/496 (98%), Gaps = 1/496 (0%)
Strand = Plus / Minus
Query: 4 ggaattctgtagtaggagtcaactacagcttgtttagtgctaataatggtactcccacat 63
|||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 ggaattctatagtaggagtgaactacagcttgtttagtgctaataatggtactcccacat 436
Query: 64 tttgggacaaaaatccattatcactcacttatgtatatattcccacattgtatgcatatt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 tttgggacaaaaatccattatcactcacttatgtatatattcccacattgtatgcatatt 376
Query: 124 taatgtgaatgtgaatggagcagtacctatacatagcagttaagatactatttcgcaagg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 taatgtgaatgtgaatggagcagtacctatacatagcagttaagatactatttcgcaagg 316
Query: 184 gttggtggtgcatgtaattcaatggtaagacggttgccaatcatgtgtaaagctctgggt 243
|||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 315 gttggtggtgcatgtagttcaatggtaaaacggttgccaatcatgtgtaaagctctgggt 256
Query: 244 cttctccccagctccatagcaaaagaaaattcctatgcaatccattccaaaaagcaacct 303
||| |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 255 cttatccccagctccatagcaaaagaaa-ttcctttgcaatccattccaaaaagcaacct 197
Query: 304 accagatcaattatacagtccactaatgagccaacctgctgtttgaaagaactgaaggtt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 accagatcaattatacagtccactaatgagccaacctgctgtttgaaagaactgaaggtt 137
Query: 364 gatgtacccattgtgtatcatgtgtctgccttgatggctctgtgggtccctgcctggcag 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 gatgtacccattgtgtatcatgtgtctgccttgatggctctgtgggtccctgcctggcag 77
Query: 424 gtaagcccggtccatggtcctgctggtctcaccagctgtctgtctgcacacccactgagg 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 gtaagcccggtccatggtcctgctggtctcaccagctgtctgtctgcacacccactgagg 17
Query: 484 cgagaccacacgtctg 499
||||||||||||||||
Sbjct: 16 cgagaccacacgtctg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 627
Length of database: 1026
Length adjustment: 10
Effective length of query: 617
Effective length of database: 1016
Effective search space: 626872
Effective search space used: 626872
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no125_a22.g1 MSMg01no125_a22.g1 CHROMAT_FILE:
MSMg01no125_a22.g1 PHD_FILE: MSMg01no125_a22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:36:58 2005
(652 letters)
>mm_chr11_76179688_76180740
Length = 1053
Score = 1178 bits (609), Expect = 0.0
Identities = 642/653 (98%), Gaps = 1/653 (0%)
Strand = Plus / Plus
Query: 1 agcagcaggactctccggggagagctggccctgcattttcagaggccccaagtctgattc 60
|||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||
Sbjct: 201 agcagcaggactctccggggagagatggctctgcattttcagaggccccaagtctggttc 260
Query: 61 ctagcacccatgtcagacagctcctataactccagctccaggaagacctcatggccccat 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctagcacccatgtcagacagctcctataactccagctccaggaagacctcatggccccac 320
Query: 121 ctttgtctctgcaggcactggcattcacagtctaagaataaaatgttaaaggggtggtgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctttgtctctgcaggcactggcattcacagtctaagaataaaatgttaaaggggtggtgg 380
Query: 181 tggctgaagagacggctcagcggtggagagcacttggtgttcctgcagaagacccgagtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tggctgaagagacggctcagcggtggagagcacttggtgttcctgcagaagacccgagtt 440
Query: 241 ccattcccagcacccacaaggtggcccacagccatctgttactgtagtcggagggagtcc 300
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 441 ccattcccagcacccacaaggtggcccacagccatctgttactgtagttggagggagtcc 500
Query: 301 aacagactcttctggcctctgtggcacaaggcatgcatgtggtgcacgtacacagcagtc 360
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aacagattcttctggcctctgtggcacaaggcatgcatgtggtgcacgtacacagcagtc 560
Query: 361 cgcagtgtcactttagtaaatgaatgtgggatagagaagtgagaaagatggcagaacaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cgcagtgtcactttagtaaatgaatgtgggatagagaagtgagaaagatggcagaacaga 620
Query: 421 gcggtgcaggccataagcagaaagaggcggagctagagaagcggtcgggtggtagccacg 480
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 621 gcggtgcaggccataagcagaaagaggcggagctagagaagcggtcaggtggtagccacg 680
Query: 481 ggtatgggagtgaggctgctgtagacaaaggggtgcatctccaagtagggccggcagggt 540
||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||
Sbjct: 681 ggtatgggagtgaggctgctgtagataaaggggcgcatctccaagtagggccggcagggt 740
Query: 541 ggggtgcagcaacacgtagctctctcaggctctacccagaacacgctgccaagtgg-act 599
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||
Sbjct: 741 ggggtgcagcaacacgtagctctcgcaggctctacccagaacacgctgccaagtggcact 800
Query: 600 atcacgtgagaaacagttcattttctggactaagccttctcaaaagacttcca 652
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 atcacgtgagaaacagttcattttctggactaagccttctcaaaagacttcca 853
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1053
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1043
Effective search space: 669606
Effective search space used: 669606
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
