Query= MSMg01no125_p11.b1 MSMg01no125_p11.b1 CHROMAT_FILE:
MSMg01no125_p11.b1 PHD_FILE: MSMg01no125_p11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:38:10 2005
(618 letters)
>mm_chr11_47256473_47257490
Length = 1018
Score = 1067 bits (552), Expect = 0.0
Identities = 600/616 (97%), Gaps = 1/616 (0%)
Strand = Plus / Plus
Query: 4 gaattccatgggccctcctgtccctgccacaaaagcactgcaggtataggtgcatactac 63
||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattgcatgggcccttctgtccctgccacaaaagcactgcaggtataggtgcatactac 263
Query: 64 aacacttagccttagacatgggtttcagaggctgaactctgaaagatcctcatggtgaaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 aacacttagccttagacatgggtttcagaggctgaactctgaaagatcctcatggtgaaa 323
Query: 124 cagcaatcactttaccaactgaaccatctcctaacctcataacaatacattttgaagtac 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cagcaatcactttaccaactgaaccatctcctaacctcataacaatacattttgaagtac 383
Query: 184 tcacatagtgtctgtttccactgtagaagtgcacataccctgaaggcagatgcatcattt 243
||||||||||||| |||||||||||||| |||||||||||||||||||| || |||||||
Sbjct: 384 tcacatagtgtctatttccactgtagaaatgcacataccctgaaggcaggtgtatcattt 443
Query: 244 ctagaacagcagggcgacctttaaaagctgtatgacaaatgacttaacaccacgtcacca 303
|||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 444 ctagaacagcagggtgacctttaaaagctgtatgacaaatgacttaataccacgtcacca 503
Query: 304 tcaaaaacacagcacacatacatgcatttatataggatgatttttaaagtgtactcatta 363
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tcaaaaacacagcacacatatatgcatttatataggatgatttttaaagtgtactcatta 563
Query: 364 gtttaaaatagataggggtatatgctaaaagcatttctgggcgtacaatgcttataatgt 423
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 564 gtttaaaatagataggggtatatgctaaaagcatttctgggtgtacaatgcttataatgt 623
Query: 424 cctttcctctgagcactaaagaacaaactagaaagaggtaaagtgtgtctctgtgtagct 483
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 624 cctttcctctgagcactaaagaacaaactagaaagaggtaaactgtgtctctgtgtagct 683
Query: 484 cagtggtagagcatttataaagccctgtgtttgacctctagcaccagaaattaaagggag 543
||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 684 cagtggtagagcatttataccgccctgggtttgacctctagcaccagaaattaaagggag 743
Query: 544 atgttgacactgaagaacaaaatgccacttttttgtacattgatttatctaccttgatgc 603
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 atgttgacactgaagaacaaaatgccacttttttgtacattgatttatctaccttgatgg 803
Query: 604 gagggaaaaaa-gaaa 618
||||||||||| ||||
Sbjct: 804 gagggaaaaaaagaaa 819
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 618
Length of database: 1018
Length adjustment: 10
Effective length of query: 608
Effective length of database: 1008
Effective search space: 612864
Effective search space used: 612864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no125_p11.g1 MSMg01no125_p11.g1 CHROMAT_FILE:
MSMg01no125_p11.g1 PHD_FILE: MSMg01no125_p11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:38:10 2005
(516 letters)
>mm_chr11_47405730_47406645
Length = 916
Score = 870 bits (450), Expect = 0.0
Identities = 456/458 (99%)
Strand = Plus / Minus
Query: 1 tgtcctctttttccacgccatgagcatgtgcctcagagtacaagcaaagattttattttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 tgtcctctttttccacgccatgagcatgtgcctcagagtacaagcaaagattttattttg 399
Query: 61 ttttaccctctccccctccttccctctttctcttacattttttagggcaaagactttgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 ttttaccctctccccctccttccctctttctcttacattttttagggcaaagactttgaa 339
Query: 121 tgtaattttattatttacaaatacttacttttcacacatcacagtccctaagcatcagtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 tgtaattttattatttacaaatacttacttttcacacatcacagtccctaagcatcagtc 279
Query: 181 tttacttcacttgttcaaataaatataattctctgctataatattagagggcgtgaaatg 240
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 278 tttacttcacttgttcaaataaatagaattctctgctataatattagagggcgtgaaatg 219
Query: 241 ttttgcttgggttaatagattcatttaatgaacatgtaataataacagattatgtctagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 ttttgcttgggttaatagattcatttaatgaacatgtaataataacagattatgtctagg 159
Query: 301 cactattatggacatagggaatacaatagcagtagaaaaagtctttgatgttgactactt 360
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 158 cactattatggacatagggaatacaatagcaatagaaaaagtctttgatgttgactactt 99
Query: 361 tacatcacggagacttgtgacataggcaatatcagcttcagcatactgtgtccaaagata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98 tacatcacggagacttgtgacataggcaatatcagcttcagcatactgtgtccaaagata 39
Query: 421 tttctagattgatatgcagttgtcccttaagtgatagc 458
||||||||||||||||||||||||||||||||||||||
Sbjct: 38 tttctagattgatatgcagttgtcccttaagtgatagc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 516
Length of database: 916
Length adjustment: 10
Effective length of query: 506
Effective length of database: 906
Effective search space: 458436
Effective search space used: 458436
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
