CTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAGAATCCGCGG
AATTCTTAAGAAGAGACCAGAAAAGCAGGAGGCAAAATGAATGGCTTATC
CAAGTGCTGGGGAAGGAGAGGCTGTGTATTCAAGATGGAAAGCATATAAA
TACACACACATGCATATTATGTTACATATCTATAAAAATGTGAAATGTTA
TTTATTTTGAGAATACCCAGTCATTTCCATCTGTAGTAAGAATCCATAAT
AACATTCTCTGTTTATATAACTCTTTTCACCTCAAGAGATCCCAAATGCA
TTTCAGACAGTTCTATATACAAACAGAGGGCAGGAGCGCCGCCATCTCTA
CAATGTGGTGGGAGCCAGGAAGAAAATGCTTGTGTGGCTGCATTTATCTT
GGAGAGCACTAATAGGAGAGCACAGAGCTGGTAAAAAGGCAGCGGAAGCT
TATGCTCATCAGACATTGTGAGAGGGGCCTTCCATGCCTGGGGGACACTT
GGTGACACCTCAAATCTTGATAGCTAATTGAAAAAAAAAGCTAAAAGAAA
TTCAGTCTATTTACTTTGGGAGAATGAGGGCTGATTCAGGACAAGGCAAA
GTTAGTGTCCTGTGGTCCGGAGTCTAGAGCATAGACATCAATCAGACACA
AGCATTCTTCCCCTGCAGTTTCTGATGTTGTGTTTGCTTGTGACAA

TGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXTCTGTTTGGTTCTATATTCCAGTTTTTGATTGAGTTG
TTTGGTTTTTTTGGAGGTTAGCTTCATGAGTTCTTTACATATTTTGGATA
TTAGCCCTCTATCATATGTGGGGTTAGTGAAGACATTTTTCCCAATCAGT
AGATTGCTGATTTGTCCCATTGACTATGTCCTTTGCCTTACAGAAGCTTT
TAAATTTTATGAGGTCTTGTTTATCAATTCTTGACCTTAGAGCCTGAGCC
ATTGGAGCTCTATTTAGGGAATTTCCTCTGTGCCAGTAAGTTTGAGACTC
TTTCCTACTTTCTCTTCTATTAGATTCAGCGTATCTGGTTCTAGATTGAG
GTCCTTGATCCACCTGGACTTTCATATTGATCAAAGAAAATTCTACCAAG
AGAAAGTCTCAATTCTGAATATCTATGCCCCAAATGTTAGGGTACCCACA
TTCATAAAAGAAACTTTACTAAAGCTCAAAATACACATTGAACTCCACAC
AATAATAGTGGAAGATTCATCACCCCTCTTTCACCAGTGGATGGATAATG
GATACAGAAACTAAACTGATACATAGTGAATCTTATAGAGGTTATGAAGA
AAATGAATTTACTTCTAACATTTTCCCCTAAAACAAAAAAATTCCCTTCT
TCTTGGTACCTCACACTACC

Query= MSMg01no126_j24.b1 MSMg01no126_j24.b1 CHROMAT_FILE:
MSMg01no126_j24.b1 PHD_FILE: MSMg01no126_j24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:39:05 2005
         (563 letters)



>mm_chr11_25610541_25611506
          Length = 966

 Score = 1042 bits (539), Expect = 0.0
 Identities = 555/561 (98%), Gaps = 3/561 (0%)
 Strand = Plus / Plus

                                                                       
Query: 6   gaattcttaagaagagac-cagaaaagcaggaggcaaaatgaatggcttatccaagtgct 64
           |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattcttaagaagagaatcagaaaagcaggaggcaaaatgaatggcttatccaagtgct 265

                                                                       
Query: 65  ggggaaggagaggctgtgtattcaagatggaaagcatataaatacacacacatgcatatt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 ggggaaggagaggctgtgtattcaagatggaaagcatataaatacacacacatgcatatt 325

                                                                       
Query: 125 atgttacatatctataaaaatgtgaaatgttatttattttgagaatacccagtcatttcc 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 atgttacatatctataaaaatgtgaaatgttatttattttgagaatacccagtcatttcc 385

                                                                       
Query: 185 atctgtagtaagaatccataataacattctctgtttatataactcttttcacctcaagag 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 atctgtagtaagaatccataataacattctctgtttatataactcttttcacctcaagag 445

                                                                       
Query: 245 atcccaaatgcatttcagacagttctatatacaaacagagggcaggagcgccgccatctc 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 atcccaaatgcatttcagacagttctatatacaaacagagggcaggagcgccgccatctc 505

                                                                       
Query: 305 tacaatgtggtgggagccaggaagaaaatgcttgtgtggctgcatttatcttggagagca 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 tacaatgtggtgggagccaggaagaaaatgcttgtgtggctgcatttatcttggagagca 565

                                                                       
Query: 365 ctaataggagagcacagagctggtaaaaaggcagcggaagcttatgctcatcagacattg 424
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 ctaataggagagcagagagctggtaaaaaggcagcggaagcttatgctcatcagacattg 625

                                                                       
Query: 425 tgagaggggccttccatgcctgggggacacttggtgacacctcaaatcttgatagctaat 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 tgagaggggccttccatgcctgggggacacttggtgacacctcaaatcttgatagctaat 685

                                                                       
Query: 485 tgaaaaaaaaa--gctaaaagaaattcagtctatttactttgggagaatgagggctgatt 542
           |||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 686 tgaaaaaaaaaaagctaaaagaaattcagtctatttactttgggagaatgggggctgatt 745

                                
Query: 543 caggacaaggcaaagttagtg 563
           |||||||||||||||||||||
Sbjct: 746 caggacaaggcaaagttagtg 766


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 563
Length of database: 966
Length adjustment: 10
Effective length of query: 553
Effective length of database: 956
Effective search space:   528668
Effective search space used:   528668
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)