Query= MSMg01no127_b21.b1 MSMg01no127_b21.b1 CHROMAT_FILE:
MSMg01no127_b21.b1 PHD_FILE: MSMg01no127_b21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:39:45 2005
(205 letters)
>mm_chr11_118679751_118680355
Length = 605
Score = 277 bits (143), Expect = 4e-79
Identities = 191/213 (89%), Gaps = 12/213 (5%)
Strand = Plus / Minus
Query: 1 tgggtttcccacagactcttgcctgtttttagcacagcgagaacctgtcacgatcaactt 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 334 tgggtttcccacagactcttgcctgtttttagcacagcgagaacctgtcaggatcaactt 275
Query: 61 catggttttctcccctccccacatcctctgctattgcagctgagtttctctttacagcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 catggttttctcccctccccacatcctctgctattgcagctgagtttctctttacagcaa 215
Query: 121 aagagcgcgcgcgcgtgcgtgcgtgcgtgcgtgcgtgtgtgtgtgtgtgtgtgtatgtgc 180
||||| ||||||| ||| | ||| ||| || | ||||||||||||| |||||||||
Sbjct: 214 gagagcacgcgcgcacgcgcgagtgtgtg--tg--tatgtgtgtgtgtgtatgtatgtgc 159
Query: 181 gtatgtg--------tacataggtgagtgtgtg 205
||||||| ||||||||||||||||||
Sbjct: 158 gtatgtgagcatgtgtacataggtgagtgtgtg 126
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 205
Length of database: 605
Length adjustment: 8
Effective length of query: 197
Effective length of database: 597
Effective search space: 117609
Effective search space used: 117609
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no127_b21.g1 MSMg01no127_b21.g1 CHROMAT_FILE:
MSMg01no127_b21.g1 PHD_FILE: MSMg01no127_b21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:39:45 2005
(290 letters)
>mm_chr11_118509728_118510417
Length = 690
Score = 476 bits (246), Expect = e-139
Identities = 279/290 (96%)
Strand = Plus / Plus
Query: 1 acctggagctctgccacctgcagccctcagggcttggtgtcactggccgcccgtgtggac 60
||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||
Sbjct: 201 acctggagctctgccacctgcagccctcagggcttggtgtcgctggcagggtgtgtggac 260
Query: 61 tccagcagaccttaggatagagctgctgactcagccctgcaggctgtggccgcttgccat 120
||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 261 tccagcagaccttaggatagagctgctgactcagccctgcaggttgtggccacttgccat 320
Query: 121 ggtcagctcagcgtctgctcagctggagtgtctggggcaggtgatgacagaacaggaccc 180
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 321 ggtcagctcagcgtctgctcagctggagtggctggggcaggtgatgacagaacaggaccc 380
Query: 181 ggtggccactggaccttagtgacagaggaggaaatggaagccaggaaagagaggcccaca 240
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 381 ggtggccactggaccttagtgacagaggaggaaatggaagccaggacagagaggcccaca 440
Query: 241 gtcacatgtcctatatgtgcagggtcagcatctgttcccttgctgggtcc 290
||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 441 gtcacatgtcctacaggtgcagggtcagcatctgttcccttgctgggtcc 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space: 191361
Effective search space used: 191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
