ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGCAGAACATCCGCGGAATT
CCACATCCCTTCCCAAATATCTTTAATCTACCTTGCTTTTATGTTTCCTG
ATAATGCTTCTACTTGCAGCACCAGATTTTGAAATTATCACCCCAGGGAC
AGCATCACAATTGTCTGAGCTGTTGTAACGAGCAAGACTACAGGTTCTGT
CACTGTTTCAGTTAAAGGATCAATATTTGTATCTTGTCCAAAGTTGGCTG
TCTCTCCTTGACAATAACTTCCACCACTCCCTTGAGGAATAACCTAAAAA
TGTCTGCTATTTGCTACATTAGTTCTCCTTTTCTCTCTCACTATCCATTG
TTTTGGTAAAATACTTTTGGTCTCACTATCTCTGATTCTATCAGTTTTAC
TCCCCATCCCTTTCAACATTTGCACTACTTTTGGACATAGGACAGGTAGC
TGATGGAAGGTTGTCTCAAAGATGTCACAGTGTCAACCTGGTATTTAGAT
ACTTCTTGAAATATATTTCCTAACAACACAATTACAACTATGAGATATAG
AGTCAGAAATAGCTGCTGAACACATGCATGAAAACTATGTCATTAGTAGT
CTTTAAAAAATAAATTTCACTTACTTTCATTTATTTGTGTGTGTTTATAT
CTCTGTGCATACACATGTGTGATTGTGTGTGTGCGTGCGTGCGTGCGTGC
GTGCATGCA

AATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXATTTCCCTGACGATTAAGGATGTTGAA
CATTTTTTTAGGTGTTTCTCAACCCTTTGGTATTCCTCAGTAGAGAATTC
TTTGTTTATCTCTGTACCACATTTTAAAATAGGGTTATTTGATTTTTCTG
GAGTCCAACTTCTTGAGTTCCTTATATATATTAGATATTAGCTCCCTATT
GGGTTTAGGGTTGGTAAAGATCTTTTCCCAATCTGTTGGTTGCCATTTTG
TCTTATTGACAGTGTCCTTTGCCTTACAGAAGCTTTGCAATTTTATGAGG
TCCCATTTGTCGATTCTTCATCTTACAGCACAAACCATTGGTGTTCTGTT
CAGGAATTTCCCCCCTGCGCCCCCATCTTTGAGGCTCTTCCCCACTTTCT
GTAAGTTTCAGTGTCTCTGGCTTTATTTGCAGTTCCTTGATCCATTTAGA
CTTGAGCTTTGTACACGGAGAGAAGAATGGATCAATTTGAGTTCTCCTAC
ACGATAACTGCCAGTTGAGCCAGCACCATTTGTTGAAAATGCTGTCTTTT
TTCTACTGAATGGTTTTTGCTCCTTTTTCAAAGATCAAGCGACTATAAGT
GTGTGGGTTCATTTCTGAATCTTCAATTCTATTCCATTGATCTACAAAGG
CAAGATTCTA

Query= MSMg01no128_e21.b1 MSMg01no128_e21.b1 CHROMAT_FILE:
MSMg01no128_e21.b1 PHD_FILE: MSMg01no128_e21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:41:21 2005
         (624 letters)



>mm_chr11_39922318_39923340
          Length = 1023

 Score = 1100 bits (569), Expect = 0.0
 Identities = 608/621 (97%), Gaps = 3/621 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttaatctaccttgcttttatgtttcctgataatgcttctacttgcagcaccagattttg 60
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 tttaatctaccttgcttttatgtttcctgataatgcttctacttgcagcatcagattttg 260

                                                                       
Query: 61  aaattatcaccccagggacagcatcacaattgtctgagctgttgtaacgagcaagactac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaattatcaccccagggacagcatcacaattgtctgagctgttgtaacgagcaagactac 320

                                                                       
Query: 121 aggttctgtcactgtttcagttaaaggatcaatatttgtatcttgtccaaagttggctgt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aggttctgtcactgtttcagttaaaggatcaatatttgtatcttgtccaaagttggctgt 380

                                                                       
Query: 181 ctctccttgacaataacttccaccactcccttgaggaataacctaaaaatgtctgctatt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctctccttgacaataacttccaccactcccttgaggaataacctaaaaatgtctgctatt 440

                                                                       
Query: 241 tgctacattagttctccttttctctctcactatccattgttttggtaaaatacttttggt 300
           |||||||  || ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 441 tgctacaggaggtctccttttctctctcactatccattgttttggcaaaatacttttggt 500

                                                                       
Query: 301 ctcactatctctgattctatcagttttactcccc-atccctttcaacatttgcactactt 359
           |||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 501 ctcactatctctgagtctatcagttttactcccctatccctttcaatatttgcactactt 560

                                                                       
Query: 360 ttggacataggacaggtagctgatggaaggttgtctcaaagatgtcacagtgtcaacctg 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 561 ttggacataggacaggtagctgatggaaggttgtctcaaagatgtcacagtgtcaac-tg 619

                                                                       
Query: 420 gtatttagatacttcttgaaatatatttcctaacaacacaattacaactatgagatatag 479
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 620 -tatttagatacttcttgaaatatatttcctaacaacacaattacaactatgagatataa 678

                                                                       
Query: 480 agtcagaaatagctgctgaacacatgcatgaaaactatgtcattagtagtctttaaaaaa 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 agtcagaaatagctgctgaacacatgcatgaaaactatgtcattagtagtctttaaaaaa 738

                                                                       
Query: 540 taaatttcacttactttcatttatttgtgtgtgtttatatctctgtgcatacacatgtgt 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 taaatttcacttactttcatttatttgtgtgtgtttatatctctgtgcatacacatgtgt 798

                                
Query: 600 gattgtgtgtgtgcgtgcgtg 620
           ||||||||||| | |||||||
Sbjct: 799 gattgtgtgtgcgtgtgcgtg 819


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1023
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1013
Effective search space:   621982
Effective search space used:   621982
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)