Query= MSMg01no128_h02.b1 MSMg01no128_h02.b1 CHROMAT_FILE:
MSMg01no128_h02.b1 PHD_FILE: MSMg01no128_h02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:41:32 2005
(247 letters)
>mm_chr11_86228608_86229253
Length = 646
Score = 416 bits (215), Expect = e-121
Identities = 233/239 (97%), Gaps = 1/239 (0%)
Strand = Plus / Plus
Query: 5 cctcgaactcagaaatccgcctgcctctgcctcccgagtgctgggattaaaggcgtgtgc 64
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 cctcgaactcagaaatccacctgcctctgcctcccgagtgctgggattaaaggcgtgtgc 264
Query: 65 caccacgcccggcccacattttaaaattttgaaaaagccctcaatacatgcacatgttac 124
|||||| || |||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 265 caccacacctggcccacattttaaaa-tttaaaaaagccctcaatacatgcacatgttac 323
Query: 125 catgcctttgcatttctgttcttttgacttagactctcagccttgtagagatagcaagta 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 catgcctttgcatttctgttcttttgacttagactctcagccttgtagagatagcaagta 383
Query: 185 ccctgctgtatccattttgtgttatctgtatgatatgagcacactgtgtgtacatgctt 243
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 384 ccctgctgtatccattttgtgttatctgtatgatatgagtacactgtgtgtacatgctt 442
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 646
Length adjustment: 9
Effective length of query: 238
Effective length of database: 637
Effective search space: 151606
Effective search space used: 151606
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no128_h02.g1 MSMg01no128_h02.g1 CHROMAT_FILE:
MSMg01no128_h02.g1 PHD_FILE: MSMg01no128_h02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:41:32 2005
(193 letters)
>mm_chr11_86384840_86385433
Length = 594
Score = 344 bits (178), Expect = 2e-99
Identities = 190/194 (97%), Gaps = 1/194 (0%)
Strand = Plus / Minus
Query: 1 gagtgataaacatggtggccagaagaggaatcgctggtatgcatgctgcgaagccatccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 gagtgataaacatggtggccagaagaggaatcgctggtatgcatgctgcgaagccatccc 335
Query: 61 gagtcagagcagacattgcaacattcaaaggccaggccagcaagccctactgttgttctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 gagtcagagcagacattgcaacattcaaaggccaggccagcaagccctactgttgttctt 275
Query: 121 tctggaactacattctttcccattaaaagg-gggagggggggaagttgtgtatataaaca 179
|||||||||||||||||| ||||||||||| ||| ||||||| |||||||||||||||||
Sbjct: 274 tctggaactacattcttttccattaaaaggtggggggggggggagttgtgtatataaaca 215
Query: 180 atcaaaagcggtaa 193
||||||||||||||
Sbjct: 214 atcaaaagcggtaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 193
Length of database: 594
Length adjustment: 8
Effective length of query: 185
Effective length of database: 586
Effective search space: 108410
Effective search space used: 108410
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
