ACTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXCCAAAGAGGATCCGCG
GAATTCAAGAGGTCCCTAATACATGTTATCTAAATGTTAAAATGATAATT
CATAAGTAAGCGTATATGAATATCTATTCTTGCCTCTGCTAGAAATGAAA
AAGCAAAGAAAAAACAGAATGCTACCCCAAACCCTTCATAGGTACTTTAA
TAAATACAGCTATTAAACCATAGCTTTATGTATCCCACTTCTGGAAAGTA
TTTAAATTAGTAGTTGCATAAGTAAATGCAAATATTCTTTATTCTTTATA
ATCAGTCTCCCATATATTTAACAGTTTGAGGCTTTACCCAGTGACATAAC
AGTGGTAGTGAAAAAGTTAAATATGCAGCACACAAAACCTGAAACTTGAC
ATTGGTCATTAAAACAAAAACTGAATTCCTAAATCCAAGCAATCAAAAGA
TGTTTATTTTTTATAAAGATCTGTAAAAAAATAATTTTTCAAACAGCTTT
ACTTTCATAGAGAAAACTTTCTACAGAGGTTGACTAAGATTTTAATATTT
TCAATTGTACCATCATTAAATAAGGTGGGACACCATATGAATTTCATTGC
ACTGGAAGAAATGCAGAGCATTTTTAATATAAAGTATACAGAGCATTCTA
GGCAGCTACAGCTGTGTTACAGCTATGTGTTCTTTTGGATTTGGTCCAAA
GAAACCTGAGTCTGTT

TCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXACTGCCCCAAGGACCAAAGCCAGGGAA
GTCACCATGGGGAGAAAGAAGGACAGAGCAGGGAGACCAAAATGTCTGGA
TTATATATAGGGAAGAGACTCTGTCTGGTGGAAGAGCAGCCCAGCCAATG
GGCTAAAAGTTCAGGGCTGGGGGCAGGGTATGCCAGGTAGGGACTGAGGG
ATGCTGGGAGAACCTGGAGACCAGGTCTGCTTTGATATGTAAACTATGCC
TATCCTGAGGTCTGAAACCAAACATTTATTAGAGAAACATGTGCCTGTAT
ATGGGACTTTGAGGTGGGAACTTTGTTAACAGCATTCTAAAAGTACAAGC
TATAGATTAATAGCTTGACCCGGCTGTCTGCTGCAATAATAAGATTGCCG
GTGTATGAATACTGCCACAAACTTGGGCAGAGGACAGCTGGGAAGGGATA
CTTGCTATGCCTCATCCCTACAATGAGCTTAAATCCTGTTTGCTAAGTAG
CTCTGGTAAGTCAGACTAGGCTTTCGACAGAACTGCTGTCGAACGTCTAA
ATGACTATGTTCCAGAATACTTACCCTATATGCTTACACATTCTTGAGAA
GTTCCAAGATACCCGAATCAAGATACGCTGGTTAAAGAATCCTAAATACT
TCTTAATCGCCCTATGATTTTGATAAATCGGGTTAGCTG

Query= MSMg01no131_k12.b1 MSMg01no131_k12.b1 CHROMAT_FILE:
MSMg01no131_k12.b1 PHD_FILE: MSMg01no131_k12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:45:57 2005
         (633 letters)



>mm_chr11_21219912_21220945
          Length = 1034

 Score = 1195 bits (618), Expect = 0.0
 Identities = 630/634 (99%), Gaps = 1/634 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgttatctaaatgttaaaatgataattcataagtaagcgtatatgaatatctattcttg 60
           |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||
Sbjct: 834 atgttatctaaatgttaaaatggtaattcataagtaagcgtatatgaatatgtattcttg 775

                                                                       
Query: 61  cctctgctagaaatgaaaaagcaaagaaaaaacagaatgctaccccaaacccttcatagg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 cctctgctagaaatgaaaaagcaaagaaaaaacagaatgctaccccaaacccttcatagg 715

                                                                       
Query: 121 tactttaataaatacagctattaaaccatagctttatgtatcccacttctggaaagtatt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 tactttaataaatacagctattaaaccatagctttatgtatcccacttctggaaagtatt 655

                                                                       
Query: 181 taaattagtagttgcataagtaaatgcaaatattctttattctttataatcagtctccca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 taaattagtagttgcataagtaaatgcaaatattctttattctttataatcagtctccca 595

                                                                       
Query: 241 tatatttaacagtttgaggc-tttacccagtgacataacagtggtagtgaaaaagttaaa 299
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 594 tatatttaacagtttgaggcttttacccagtgacataacagtggtagtgaaaaagttaaa 535

                                                                       
Query: 300 tatgcagcacacaaaacctgaaacttgacattggtcattaaaacaaaaactgaattccta 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 tatgcagcacacaaaacctgaaacttgacattggtcattaaaacaaaaactgaattccta 475

                                                                       
Query: 360 aatccaagcaatcaaaagatgtttattttttataaagatctgtaaaaaaataatttttca 419
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 474 aatccaagcaatcaaaagatgtttattttttataaagatctgtaaaaaaataatttctca 415

                                                                       
Query: 420 aacagctttactttcatagagaaaactttctacagaggttgactaagattttaatatttt 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 aacagctttactttcatagagaaaactttctacagaggttgactaagattttaatatttt 355

                                                                       
Query: 480 caattgtaccatcattaaataaggtgggacaccatatgaatttcattgcactggaagaaa 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 caattgtaccatcattaaataaggtgggacaccatatgaatttcattgcactggaagaaa 295

                                                                       
Query: 540 tgcagagcatttttaatataaagtatacagagcattctaggcagctacagctgtgttaca 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 tgcagagcatttttaatataaagtatacagagcattctaggcagctacagctgtgttaca 235

                                             
Query: 600 gctatgtgttcttttggatttggtccaaagaaac 633
           ||||||||||||||||||||||||||||||||||
Sbjct: 234 gctatgtgttcttttggatttggtccaaagaaac 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1034
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1024
Effective search space:   637952
Effective search space used:   637952
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)