ATTTGCGGCGCTAAACGACTCCTATATGCAGAGAATCCGCGGAATTCTTC
AGAAACTCCTAATAAAGTGCTGCCTGAGACCATTGCTGCAAAGATCGCCT
CGAGATGATAAATGATCCCAGAAGCATTTACTCTTCAAGGTAAGGCATCA
TGAGGGAAAGAAACAACAATGAATGACCAGAGAGACTAAAACACAGTTAG
AAGGCTCACATTTCAGTCATTACTAACTTTGACCTTTGTGATTCCATCGT
CATCTGAAGACTGCAGGGTACAGACCAGAAAAAAAACAACAACAACAACA
ACAACAACAAAAACTATCTCCCTACTCTCTCATATTAGTCAAGCTTACAA
ATTACTCCCTTGGAGACAACATCATTCTAACACTGTGATATATAAAAAAA
AGTTTTCATAAGATATTTAACTGGTAATAATATGGTTCTTTTGCCATTTG
GGGATTTCACCTCTTAACTAGTATTATTAGTTAGTGAATTTCCTCTCACA
ATGCATCTAAACACTATACTTAAATCTTTTTTGATATATGATTTATTCTG
CCCCTTTCCACTGATGACCCTCCTCTCTGAACAGATCCCGTCTTCCACCT
TGCATGCTAAGCGTTTTCCAACTAAGAAAATGAATTTTTACAAGGCTCTC
CCCACACAGATTGCCTGGGCAAGAAAAGGAGCCTCAGTGTTTCCCTGAGC
TGCGCAGTTAATGCGGTCCTT

ATGTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXTCCCTAAGCAACTTTAATACATGCTTATGTATAA
TATGTGTGTGTTTTTGACTGTGTGTAGGTATGCACTGTGCCACACTCTCT
GTGTGTCTCCTTGTCTCTGTCTCTCTGTTTCTTCTGTCTGTCTGTCTGTC
TGTCTGTCTGTCTGCCTGTCTCTCTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTTTGTGTACTAGTCAGAGGTAAACCTCAGAATTTTGTTGTTGTT
GTCAAGTCTCATAAGCTATGCCAGCCAGTCCAGGAACTCCCAGGAGGTTT
TCTGTTTCTTTTTCCCACCCCACCACAGAATCGCTGTGATTGCAGATGCA
TGCTACTGCCCGCCCTAAAAAAAAAAAAAAAAGCCCCGGGGGGGTGTTGA
TTCAAACTACATTACTCAAAATTGTCACTTATTTTAAAAACCTTTATCCT
CACCTTTTCTTCTTCACTTCCCTGCTATTTATCTTTCTTACCTTTTCCCC
CCGAACTTTTTTAAATAAAGACCTCTTTCATAATTTTTACAAATCTTTAC
TTTTGTATCCAACTATTAACATTTTTTTTCACATATACCTTCTTCTTAAA
TTCCTTAATTACAACTTTTTTTTTCCCCTGTTCATCCATCTTTATAACAC
TATGTGATCATTATTATCTACCAAACCTTCATTTTTT

Query= MSMg01no133_h21.b1 MSMg01no133_h21.b1 CHROMAT_FILE:
MSMg01no133_h21.b1 PHD_FILE: MSMg01no133_h21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:48:19 2005
         (676 letters)



>mm_chr11_90664229_90665298
          Length = 1070

 Score =  922 bits (477), Expect = 0.0
 Identities = 575/625 (92%), Gaps = 33/625 (5%)
 Strand = Plus / Minus

                                                                        
Query: 54   agatcgcctcgagatgataaatgatcccagaagcatttactcttcaaggtaaggcatcat 113
            |||||||||||||||||||||||| |||||||||| || |||||||||||||||||||||
Sbjct: 1070 agatcgcctcgagatgataaatgagcccagaagcacttgctcttcaaggtaaggcatcat 1011

                                                                        
Query: 114  gagggaaagaaacaacaatgaatgaccagagagactaaaacacagttagaaggctcacat 173
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1010 gagggaaagaaaaaacaatgaatgaccagagagactaaaacacagttagaaggctcacat 951

                                                                        
Query: 174  ttcagtcattactaactttgacctttgtgattccatcgtcatctgaagactgcagggtac 233
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 950  ttcagtcattactaactttgacctttgtgattccatcgtcatctgaagactgcagggtac 891

                                                                        
Query: 234  agaccagaaaaaaaacaacaacaacaacaacaacaacaaaaactatctccctactctctc 293
            ||||||||||||                      || | | | |||||||||||||||  
Sbjct: 890  agaccagaaaaa----------------------aatatata-tatctccctactctc-- 856

                                                                        
Query: 294  atattagtcaagcttacaaattactcccttggagacaacatcattctaacactgtgatat 353
             ||||||||||||||||| ||||||||||||||||||||||||   ||||||||||  ||
Sbjct: 855  -tattagtcaagcttacatattactcccttggagacaacatca---taacactgtg--at 802

                                                                        
Query: 354  ataaaaaaaagttttcataagatatttaactggtaataatatggttcttttg-ccatttg 412
            ||||||||| |||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 801  ataaaaaaatgttttcataagatatttaactggtaataatatggttattttgcccatttg 742

                                                                        
Query: 413  gggatttcacctcttaactagtattattagttagtgaatttcctctcacaatgcatctaa 472
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 741  gggatttcacctcttaactagtattattagttagtgaatttcctctcacaatgcatccaa 682

                                                                        
Query: 473  acactatactt-aaatcttttttgatatatgatttattctgcccctttccactgatgacc 531
            |||| |||||| |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681  acaccatacttaaaattttttttgatatatgatttattctgcccctttccactgatgacc 622

                                                                        
Query: 532  ctcctctctgaacagatcccgtcttccaccttgcatgctaagcgttttccaactaagaaa 591
            ||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||
Sbjct: 621  ctcctctctgaacagatcctgtcttccacctttcatgctaagcgttttccatctaagaaa 562

                                                                        
Query: 592  atgaatttttacaaggctctccccacacagattgcctgggcaagaaaaggagcctcagtg 651
            |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 561  atgaatttttacaaggctctccccacacagattgcctgggcaagaaaaagagcctcagtg 502

                                     
Query: 652  tttccctgagctgcgcagttaatgc 676
            |||||||||||||||||||||||||
Sbjct: 501  tttccctgagctgcgcagttaatgc 477


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 676
Length of database: 1070
Length adjustment: 10
Effective length of query: 666
Effective length of database: 1060
Effective search space:   705960
Effective search space used:   705960
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)