TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCT
TTTCCTTGCTCAATGCCTAATACAGATAAAAATGTAAGGTTCCAATGAGT
TCACAGTCAACGCTGCAACAATGTATATAACGAAGTGTGGTATTTGTTTT
GGCCATAGAATTTAATTTTGTTGGTTTGAGAAATGATTGCATGAGAGTAT
TTGTAGAATTCTGACAGACCAACTATGTTGTTCTTGTGTTTTGGTATATA
TTATGGGAGAGGTGACCTACTAGCGAGGCACCATGGGGTTATCATTGTCC
AGGTTCTAATTTTCTTAGCTACATGCTTCAGAATAACTGACTGACATGTT
ACAAAATAAGACACATTTATGATTTTGAAGCTGTTTTTTTAAGCCTTTTG
TTTGCTTTGTAAGAAAACATAAGGATTTTAATGAGAACAATAAAACTCTT
GCCTTGACCTAACTTTGGAATATCTAAAGAGAATTAACAAATTTCTTTAG
AGATTAAATTGAATGGGAGAGATCTCATGGGGTCCGATCCACTAACAAAG
AACTACAGACAACTAAGAAATGCTAAATCCAAGAGAAATAGTCTTCTCAA
GGCATAAGCCAGCTTTGTTTTCTAATATCAAATGGGTAGCTCTGAGATTA
GGTATACNCCAATAATACTAAACAGACTGAGCAGCATATTTATAT

GATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXCTCAGACTTGAATCTTTGGGCAGGAGCATCCT
CTGTTGTGAGGTGTTCTCTGATCTGCAGAATGCTTGCCGGAATCACTAGA
TATACTCATTAGATCCCAGTAACAGCTTCTGGCTAGACTCTAACAACCAA
AAACATTTTCACATTGCCAAATACTGCTTGAGGGCCCCAACTGCTTTCAG
TTGGGAAGCAGTGCATTAAGACAAAACACACATGGGGCTAGGAATTGGGT
CAGTTGGTAGAACAACTGCCTAGTGTGCAAAAAGCCTGGCTTGATCCCAA
GCTCAGCACATAATGAACATGGTAGCCTATCTGCAATTTCTCCAATCATG
AGACAGAGACAGGGGCATCAGGAGTTCAAGGTCATCCTCCGTGATATAAT
GAGTTTGAATTCAGTATAGGATACAGGGACCCTGCCTAAGGAAACACACA
CAAAAGAGACAACCACATAGGCAAACAGACACACACAGACACAGATACAT
ATACCTGATAGGGCTATTGTGAATATCTAAGAGATTAAAAGCAGGTAAGG
ATTTCAATACTGTTCTTGGCTTAAGACAAAGGATCAGTAAATGGCTGCTT
GTTATTATAATAATTAAACCGTCTCAATTAACCTGCTCCATCTT

Query= MSMg01no133_i07.b1 MSMg01no133_i07.b1 CHROMAT_FILE:
MSMg01no133_i07.b1 PHD_FILE: MSMg01no133_i07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:48:21 2005
         (519 letters)



>mm_chr11_93098632_93099551
          Length = 920

 Score =  951 bits (492), Expect = 0.0
 Identities = 510/516 (98%), Gaps = 1/516 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcttttccttgc-tcaatgcctaatacagataaaaatgtaaggttccaatgagttc 63
           ||||||||||||  |  |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttttccagggatcaatgcctaatacagataaaaatgtaaggttccaatgagttc 264

                                                                       
Query: 64  acagtcaacgctgcaacaatgtatataacgaagtgtggtatttgttttggccatagaatt 123
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 acagtcaatgctgcaacaatgtatataacgaagtgtggtatttgttttggccatagaatt 324

                                                                       
Query: 124 taattttgttggtttgagaaatgattgcatgagagtatttgtagaattctgacagaccaa 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 taattttgttggtttgagaaatgattgcatgagagtatttgtagaattctgacagaccaa 384

                                                                       
Query: 184 ctatgttgttcttgtgttttggtatatattatgggagaggtgacctactagcgaggcacc 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctatgttgttcttgtgttttggtatatattatgggagaggtgacctactagcgaggcacc 444

                                                                       
Query: 244 atggggttatcattgtccaggttctaattttcttagctacatgcttcagaataactgact 303
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 atggggttatcgttgtccaggttctaattttcttagctacatgcttcagaataactgact 504

                                                                       
Query: 304 gacatgttacaaaataagacacatttatgattttgaagctgtttttttaagccttttgtt 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gacatgttacaaaataagacacatttatgattttgaagctgtttttttaagccttttgtt 564

                                                                       
Query: 364 tgctttgtaagaaaacataaggattttaatgagaacaataaaactcttgccttgacctaa 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tgctttgtaagaaaacataaggattttaatgagaacaataaaactcttgccttgacctaa 624

                                                                       
Query: 424 ctttggaatatctaaagagaattaacaaatttctttagagattaaattgaatgggagaga 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ctttggaatatctaaagagaattaacaaatttctttagagattaaattgaatgggagaga 684

                                               
Query: 484 tctcatggggtccgatccactaacaaagaactacag 519
           ||||||||||||||||||||||||||||||||||||
Sbjct: 685 tctcatggggtccgatccactaacaaagaactacag 720


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 519
Length of database: 920
Length adjustment: 10
Effective length of query: 509
Effective length of database: 910
Effective search space:   463190
Effective search space used:   463190
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)