Query= MSMg01no133_i12.b1 MSMg01no133_i12.b1 CHROMAT_FILE:
MSMg01no133_i12.b1 PHD_FILE: MSMg01no133_i12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:48:22 2005
(315 letters)
>mm_chr11_82711941_82712656
Length = 716
Score = 563 bits (291), Expect = e-165
Identities = 306/311 (98%), Gaps = 1/311 (0%)
Strand = Plus / Minus
Query: 6 ggaattcctgccgttc-ccaccccttgtactttctcacccatctgggccaatggttctga 64
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 ggaattcctgccggtcaccaccccttgtactttctcacccatctgggccaatggttctga 457
Query: 65 ccttcagctctctacccctatgccttccctcctagacctgtgcctttctgcttctgggac 124
|||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 ccttcagctcgctatctctatgccttccctcctagacctgtgcctttctgcttctgggac 397
Query: 125 tcaccttatagggcttgcaccacttccctacccctgctgtgttggcggcccggacggtaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 tcaccttatagggcttgcaccacttccctacccctgctgtgttggcggcccggacggtaa 337
Query: 185 ggcagtaactcgtgtttgacttcagctccatcagcttgacagtggtacccaggatcttgt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 ggcagtaactcgtgtttgacttcagctccatcagcttgacagtggtacccaggatcttgt 277
Query: 245 tgaagatccaggggcgggtcttgatcttgggcgtgtccttgtcagctggtttggttgcct 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 tgaagatccaggggcgggtcttgatcttgggcgtgtccttgtcagctggtttggttgcct 217
Query: 305 cctgcagcagc 315
|||||||||||
Sbjct: 216 cctgcagcagc 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 716
Length adjustment: 9
Effective length of query: 306
Effective length of database: 707
Effective search space: 216342
Effective search space used: 216342
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no133_i12.g1 MSMg01no133_i12.g1 CHROMAT_FILE:
MSMg01no133_i12.g1 PHD_FILE: MSMg01no133_i12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:48:22 2005
(505 letters)
>mm_chr11_82541415_82542319
Length = 905
Score = 946 bits (489), Expect = 0.0
Identities = 501/505 (99%)
Strand = Plus / Plus
Query: 1 accagaggggcttttagccacaggaagctcagcccagccaaggtagaaaggctagcagat 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 accagaggagcttttagccacaggaagctcagcccagccaaggtagaaaggctagcagat 260
Query: 61 ctgatccatagggcaacccaggcactcagaggcagcaggccccaagacagctggatgaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgatccatagggcaacccaggcactcagaggcagcaggccccaagacagctggatgaaa 320
Query: 121 agcaaaaccaactgtacagtggatgggcaaagatcctcaaatcaaggctctggctcacac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agcaaaaccaactgtacagtggatgggcaaagatcctcaaatcaaggctctggctcacac 380
Query: 181 agaggcctatatcaactttgggaagggtgatggcttggaagaggacatcctggagtaggc 240
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agaggcctataacaactttgggaagggtgatggcttggaagaggacatcctggagtaggc 440
Query: 241 agatggtcaagtgggagctctgagggtggtacctggtgcaaatgccaagtgggcagaagc 300
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agatggccaagtgggagctctgagggtggtacctggtgcaaatgccaagtgggcagaagc 500
Query: 301 tctgtttgggggcctatgttgtaatcagtgaacgacactgcatgcccacaaaacaaaact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tctgtttgggggcctatgttgtaatcagtgaacgacactgcatgcccacaaaacaaaact 560
Query: 361 cagtgaacttctcagttcaaagcctgtgcccattgtgtcccaagagccagggaccatcac 420
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cagtgaacttttcagttcaaagcctgtgcccattgtgtcccaagagccagggaccatcac 620
Query: 421 ctgtgatatgctatggatctagccacagttcccagcatcgctgaggactataggcaggtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctgtgatatgctatggatctagccacagttcccagcatcgctgaggactataggcaggtt 680
Query: 481 gagagaaggtacagggttgctggaa 505
|||||||||||||||||||||||||
Sbjct: 681 gagagaaggtacagggttgctggaa 705
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 505
Length of database: 905
Length adjustment: 10
Effective length of query: 495
Effective length of database: 895
Effective search space: 443025
Effective search space used: 443025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
