CGGCGCTATACGACTCCTATAGTCAGAAATCCGCGGAATTCTACAGATTT
ATCGTACCAGATCTGTGGTACACACAGTTTAAGAAAAGAGCTGAAATGAA
TATAGTTCTTTATAGCCACCCAGTGCTGCCTGCCTCATGCATGCACTGTC
CCTAACTTCTGCTGCCAGCTGTCCACACCTTCTCTGTGGCTAGTTGCTCC
TGCCACATGCTTAGGAGCTGTTCCTGTTAGCAGAGCTGTTTTTGTAGTAA
CTCTAAAGCCATCCTTGTATTTCTCGCTGACCCCAGTGACTTGTGTCTAC
CTAATCCCTATTCTGTAATCCCTATTCTGTGCCTTACTGATGTTGCTAAC
CTGCAGCCTACAGACCTTTCAATGTCTCACTGCATTGCAGGCCTCTGCCT
ATTTTTCTAGGATTTGGTAGAAATTTTACATCATCAGCTTAGGTCAGAAA
GCTGTATCACATTATTTTCTTAAAATATTTTTATTTTTATGCATATGGGT
GTTTCACCAGCATGTGCATGCCCTGGTACCCAAGGAGGCCAGAAAAGGGC
AATGGATCCTCTGGAACTGGAGTTGCAAATGGTTGTGAGTCACCAGTGTA
GGTGCTGGAAACAGAACTCTGGAGGAGCAGCCAGCGCCCCTGACTGTAGA
GCCACCTCTCTAACCCTGCTGCACGTCTTCCTTTAGAAATCATATTGAAT
ATGATCAAAGTACCCAGTTGGCAGGGCTGAA

GAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXACATGTGTGTACATCTCGGCAGTTGATATAGGGTGT
TTTCTTCATTCTTCATTTTTTTTGTTTGTTTTCTTTTGGTTTTTATTTGC
AGTTTTTGTTTTTGGTTTTGGGGTTGTTTTTGACAAAACAAAAAAACCCC
CACACCCCCCACCCCCCCCCCACCCATCCCCCCCCCACCCCCACCCCTCC
CTCTCCCCCCCCACCCCCACACCCACTACCACACCCCTCACACACACACC
CCCCCCCCCCCCCCCCCCCTTTTTCTTTTCCCCCCACCTACCCCACCCAC
CACCACCCCCCCCCCCCCCACCTCCCCCCCCCCCCTCCCTCACTTACCCC
CCCCCCCCCCCTATACCCCTCCCCCCCCTCCCACACTACCCAATAAAATA
CCCCCCCACCCCACCCCACCCATCCCCCCTCCCCCTACACCCACCCCCCC
ACCCCCTCCCCCCAACCTCCTCCCCCCCCCACCCCCAACCCACCCTAATC
ACCTCCCCCCCCACCCACCTCATCCCTCTCACCACTCCATCAAACACCCA
CGCCAACCACAATCCCTCCCCTCCCCCCCCACCCCCCCCAACACACACTC
CTACCACCTCTCCCCCACCACCCCCCACCCCACCACCCCTCCCACCCTCC
CCACCCTTACACCCCCCTCATCCCCCCAACACCCCCCAACACCCCCCACC
CCCCACCCCACCCCCCCCCACACCCCCCCCCCTCTCCCTCCGCTCCCCCT
CCTC

Query= MSMg01no135_l18.b1 MSMg01no135_l18.b1 CHROMAT_FILE:
MSMg01no135_l18.b1 PHD_FILE: MSMg01no135_l18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:51:55 2005
         (630 letters)



>mm_chr11_20690552_20691582
          Length = 1031

 Score = 1125 bits (582), Expect = 0.0
 Identities = 619/632 (97%), Gaps = 3/632 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ccagatctgtggtacacacagtttaagaaaagagctgaaatgaatatagttctttatagc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccagatctgtggtacacacagtttaagaaaagagctgaaatgaatatagttctttatagc 260

                                                                       
Query: 61  cacccagtgctgcctgcctcatgcatgcactgtccctaacttctgctgccagctgtccac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cacccagtgctgcctgcctcatgcatgcactgtccctaacttctgctgccagctgtccac 320

                                                                       
Query: 121 accttctctgtggctagttgctcctgccacatgcttaggagctgttcctgttagcagagc 180
           | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 321 atcttctctgtggctagttgctcctgccacatgtttaggagctgttcctgttagcagagc 380

                                                                       
Query: 181 tgtttttgtagtaactctaaagccatccttgtatttctcgctgaccccagtgacttgtgt 240
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 381 tgtttttgtagtaactctaaagccatccttgtatttcttgctgaccccagtgacttgtgt 440

                                                                       
Query: 241 ctacctaatccctattctgtaatccctattctgtgccttactgatgttgctaacctgcag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctacctaatccctattctgtaatccctattctgtgccttactgatgttgctaacctgcag 500

                                                                       
Query: 301 cctacagacctttcaatgtctcactgcattgcaggcctctgcctatttttctagg--att 358
           |||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||
Sbjct: 501 cctacagacctttcaacgtctcactgcattgcaggcctctgcctatttttctagggcatt 560

                                                                       
Query: 359 tggtagaaattttacatcatcagcttaggtcagaaagctgtatcacattattttcttaaa 418
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 -ggtagaaattttacatcatcagcttaggtcagaaagctgtatcacattattttcttaaa 619

                                                                       
Query: 419 atatttttatttttatgcatatgggtgtttcaccagcatgtgcatgccctggtacccaag 478
           |||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||
Sbjct: 620 atatttttatttttatgcatatgggtatttcaccagcatgtgtatgccctggtatccaag 679

                                                                       
Query: 479 gaggccagaaaagggcaatggatcctctggaactggagttgcaaatggttgtgagtcacc 538
           ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 680 gaggccagaaaagggcactggatcctctggaaccggagttgcaaatggttgtgagtcacc 739

                                                                       
Query: 539 agtgtaggtgctggaaacagaactctggaggagcagccagcgcccctgactgtagagcca 598
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 agtgtaggtgctggaaacagaactctggaggagcagccagcgcccctgactgtagagcca 799

                                           
Query: 599 cctctctaaccctgctgcacgtcttcctttag 630
           |||||||||||||||||||||||||| |||||
Sbjct: 800 cctctctaaccctgctgcacgtcttcttttag 831


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 630
Length of database: 1031
Length adjustment: 10
Effective length of query: 620
Effective length of database: 1021
Effective search space:   633020
Effective search space used:   633020
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)