Query= MSMg01no136_f09.b1 MSMg01no136_f09.b1 CHROMAT_FILE:
MSMg01no136_f09.b1 PHD_FILE: MSMg01no136_f09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:41 2005
(668 letters)
>mm_chr11_73614223_73615292
Length = 1070
Score = 1226 bits (634), Expect = 0.0
Identities = 655/662 (98%), Gaps = 2/662 (0%)
Strand = Plus / Plus
Query: 9 gaattcctcattctcctccctctccagtctaccatagtattttaaaaaaagaaaaagaaa 68
|||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 209 gaattcctcattctcccccctctccagtctaccatagtatttttaaaaaagaaaaagaaa 268
Query: 69 aaaagaaaattaggtttatgtcaggtctatatgaacttcattccattca-ttttttttcc 127
|||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||
Sbjct: 269 aaaagaaaattaggtttaagtcaggtctatatgaacttcattccattcatttttttttcc 328
Query: 128 -tttttttttcaaaaaatcttgttttattattaaaccttgtatgtagtacatacctttaa 186
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 ttttttttttcaaaaaatcttgttttattattaaaccttgtatgtagtacatacctttaa 388
Query: 187 agtaaacaaagaactggcaataaccacacagagtctcctgacaagaggtgtgcagagcag 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 agtaaacaaagaactggcaataaccacacagagtctcctgacaagaggtgtgcagagcag 448
Query: 247 cgctaataaattaaatgtcaaactgtaagccataggcaaaaggttactgtcaaaaagagg 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 cgctaataaattaaatgtcaaactgtaagccataggcaaaaggttactgtcaaaaagagg 508
Query: 307 gaaaagtacacagcaaagccataaaaattggacaaccacattggaaaacactcgactgtt 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 gaaaagtacacagcaaagccataaaaattggacaaccacattggaaaacactcgactgtt 568
Query: 367 aggtaattgttaaatattccaaaacagttcagtcttctgcaacaacagccaccaaagtgg 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 aggtaattgttaaatattccaaaacagttcagtcttctgcaacaacagccaccaaagtgg 628
Query: 427 atcctaggacgttcctggctgtcactactggcaagctcagtgcactattggtagctacgg 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 atcctaggacgttcctggctgtcactactggcaagctcagtgcactattggtagctacgg 688
Query: 487 actgatccaattatgaaacaaagaacagattgtgaaaacagtttccctttttttattcca 546
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 689 actgatccaattatgaaacaaagaacagattgtgaaaacagtttccccttttttattcca 748
Query: 547 cacctgctgtacacacaaccagagaagggcatcagctactccattaccatgttttgttgt 606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 cacctgctgtacacacaaccagagaagggcatcagctactccattaccatgttttgttgt 808
Query: 607 tgttgagtgatgtaaacaacacttataaatgttacaaaaccctgtaagcatccaatcgag 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 809 tgttgagtgatgtaaacaacacttataaatgttacaaaaccctgtaagcatccaatccag 868
Query: 667 cc 668
||
Sbjct: 869 cc 870
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 668
Length of database: 1070
Length adjustment: 10
Effective length of query: 658
Effective length of database: 1060
Effective search space: 697480
Effective search space used: 697480
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no136_f09.g1 MSMg01no136_f09.g1 CHROMAT_FILE:
MSMg01no136_f09.g1 PHD_FILE: MSMg01no136_f09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:41 2005
(631 letters)
>mm_chr11_73776417_73777447
Length = 1031
Score = 1189 bits (615), Expect = 0.0
Identities = 627/631 (99%)
Strand = Plus / Minus
Query: 1 aatgaataaataggtacaaataatgcagaaatctaagaactattctccactcttataact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 831 aatgaataaataggtacaaataatgcagaaatctaagaactattctccactcttataact 772
Query: 61 ctggaatattgtcacagtgaaagtggtggtaaaatgctgacagtggtatcattagtaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771 ctggaatattgtcacagtgaaagtggtggtaaaatgctgacagtggtatcattagtaagt 712
Query: 121 caacagcaataattacctgagctgactctttctctatatcaggatattcacatgaaacac 180
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 caacagcaacaattacctgagctgactctttctctatatcaggatattcacatgaaacac 652
Query: 181 atggccttctttatttttcataaggaccttatgagatgggtaacattacttttattttta 240
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 651 atggccttctttatttttcataaggaccttatgagatgggtaccattacttttattttta 592
Query: 241 agagaaataaccaaacatttatactcattttgtaattcatctaggatctcacacctattg 300
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 agagaaataaccaaacatctatactcattttgtaattcatctaggatctcacacctattg 532
Query: 301 ggcaatagttctaggtgtcaaatctagataatctcacttcagagctttgttttcagctag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 ggcaatagttctaggtgtcaaatctagataatctcacttcagagctttgttttcagctag 472
Query: 361 gagaatggaaatgattacacatgcagcttagggtgcgatatatggagaaaaccataccaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 gagaatggaaatgattacacatgcagcttagggtgcgatatatggagaaaaccataccaa 412
Query: 421 tgaaaatggagacaaaatgagttgtttttctgctgttatctgacagctctggcgaagctg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 tgaaaatggagacaaaatgagttgtttttctgctgttatctgacagctctggcgaagctg 352
Query: 481 cgcaaggaatatccagcaccataaccaatctcacttgttcagagaacacagcgagtgcaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 cgcaaggaatatccagcaccataaccaatctcacttgttcagagaacacagcgagtgcaa 292
Query: 541 acaatgtactggtttggtagaagagcacaaaagaactagaaaccatggagtagacaatac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 acaatgtactggtttggtagaagagcacaaaagaactagaaaccatggagtagacaatac 232
Query: 601 aaataaaccacttcaggggtcaaggaactga 631
||| |||||||||||||||||||||||||||
Sbjct: 231 aaacaaaccacttcaggggtcaaggaactga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1031
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1021
Effective search space: 634041
Effective search space used: 634041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
