Query= MSMg01no136_p13.b1 MSMg01no136_p13.b1 CHROMAT_FILE:
MSMg01no136_p13.b1 PHD_FILE: MSMg01no136_p13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:53:31 2005
(597 letters)
>mm_chr11_109497876_109498872
Length = 997
Score = 650 bits (336), Expect = 0.0
Identities = 366/380 (96%), Gaps = 10/380 (2%)
Strand = Plus / Minus
Query: 218 atggtgcaggaggagctgagagttgtatatcttcatctgaagactgttagcagaatactg 277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 997 atggtgcaggaggagctgagagttgtatatcttcatctgaagactgttagcagaatactg 938
Query: 278 acttccaggcagatagaataaggatcttaaagcccattctcttcactggggagtgccaca 337
||||||||||||||||||||||||||||||||||||||| | | | |||||||||
Sbjct: 937 acttccaggcagatagaataaggatcttaaagcccattc-c--ccc-----agtgccaca 886
Query: 338 cctactccaaaaaggccacacctactccaacagggtcataccctctaatagtgccactcc 397
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 885 cctactccaaaaaggccacacctactacaacagggtcataccctctaatagtgccactcc 826
Query: 398 ctgggccaagcatatacaaaccatcacagctacatttcctgggttttgataataaaacaa 457
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 825 ctgggccaagcatatacaaaccatcacagctacatttcctgggttttgataataaaacaa 766
Query: 458 taatttgtactctcactaccccaacactgtgttacatgtatcagtgagtcacctctgcaa 517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 taatttgtactctcactaccccaacactgtgttacatgtatcagtgagtcacctctgcaa 706
Query: 518 ggctactcagcaacaaagcatgaacacaggttcaaagtacatttgtgttatgcaccagtg 577
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 705 ggctactcagcaacaaagcatgaacacaggttcaaagtacatttgtgttaggcaccagtg 646
Query: 578 tcagtgtgtgagtgtgtgtg 597
| ||||||| |||||||||
Sbjct: 645 t--gtgtgtgtgtgtgtgtg 628
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 597
Length of database: 997
Length adjustment: 10
Effective length of query: 587
Effective length of database: 987
Effective search space: 579369
Effective search space used: 579369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no136_p13.g1 MSMg01no136_p13.g1 CHROMAT_FILE:
MSMg01no136_p13.g1 PHD_FILE: MSMg01no136_p13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:53:31 2005
(436 letters)
>mm_chr11_109336892_109337727
Length = 836
Score = 731 bits (378), Expect = 0.0
Identities = 417/436 (95%), Gaps = 10/436 (2%)
Strand = Plus / Plus
Query: 1 acctaagtgctggaattataggtccgctccatcaggtttggcttgtcctggtatggtaca 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 211 acctaagtgctggaattataggtccgctccatcaggtttggcttgtcctggtgtggtaca 270
Query: 61 aagggtaggcatgattccccttttatcgatgaggcagattgacttggacccctggtgtct 120
| ||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 271 a----------tgattccccttgtagagatgaggcagattgacttggacccctggtgtct 320
Query: 121 ggataaggagaggtggctggaatccagccttgctggccacaggctgatgacttttgctgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggataaggagaggtggctggaatccagccttgctggccacaggctgatgacttttgctgg 380
Query: 181 tcagagccgggcctcacctttttcccttgaagcctagtgttccagggaaaagatgaaaac 240
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
Sbjct: 381 tcagagccgggcctcacctttttcccttgaagcctagtgatccagggaaaagatgaaagc 440
Query: 241 ccctgtttttctcccttcctcagtactgcattaccatgctaatcaaagcccccaaacaga 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 441 ccctgtttttctcccttcctcagtactgcattaccatgctaatcaaagcccccagacaga 500
Query: 301 actaactttgtttagtcctaaataagaacaaagagacctttgcagtctggagtacaggac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 actaactttgtttagtcctaaataagaacaaagagacctttgcagtctggagtacaggac 560
Query: 361 cagaaaaatcaggaaattaagctaagggccgggctgtacggttgtcctcttctgtaggtc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cagaaaaatcaggaaattaagctaagggccgggctgtacggttgtcctcttctgtaggtc 620
Query: 421 agtggtaatctgtgtg 436
||||| ||||| ||||
Sbjct: 621 agtgggaatctctgtg 636
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 436
Length of database: 836
Length adjustment: 9
Effective length of query: 427
Effective length of database: 827
Effective search space: 353129
Effective search space used: 353129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
