Query= MSMg01no137_g20.b1 MSMg01no137_g20.b1 CHROMAT_FILE:
MSMg01no137_g20.b1 PHD_FILE: MSMg01no137_g20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:54:06 2005
(624 letters)
>mm_chr11_38562992_38564017
Length = 1026
Score = 1191 bits (616), Expect = 0.0
Identities = 623/626 (99%), Gaps = 2/626 (0%)
Strand = Plus / Plus
Query: 1 agggtaggtagctcacagcaacttctaattccaacaccaatcgatccaacacctctcgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agggtaggtagctcacagcaacttctaattccaacaccaatcgatccaacacctctcgcc 260
Query: 61 tcccgggcttgctacactcacaagcatacatacacagatacacacatgcacacataaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcccgggcttgctacactcacaagcatacatacacagatacacacatgcacacataaata 320
Query: 121 attgcacacacacacttttattcttacaaatcataaatctgtattattcccataagttct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attgcacacacacacttttattcttacaaatcataaatctgtattattcccataagttct 380
Query: 181 cttcattaacactaggaaattccactcaactttatttgatgaattcttattcccaattga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttcattaacactaggaaattccactcaactttatttgatgaattcttattcccaattga 440
Query: 241 tagcggacattatcagtggtacggcatttaatatgctgattatttattttaattttgtaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tagcggacattatcagtggtacggcatttaatatgctgattatttattttaattttgtaa 500
Query: 301 gtgtatccatttggggtgaataatgtttattgtgtacttaaaatcgactttttaatggaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtgtatccatttggggtgaataatgtttattgtgtacttaaaatcgactttttaatggaa 560
Query: 361 cagttggatttggaggaagctgagaaactacttcagaatttatcctacacaccaaacccc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cagttggatttggaggaagctgagaaactacttcagaatttatcctacacaccaaacccc 620
Query: 421 agtgggtttttttt--attaatatcaaaagtaacagctttcatttattattgttacaaat 478
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agtgggttttttttttattaatatcaaaagtaacagctttcatttattattgttacaaat 680
Query: 479 aatactaatacacttctactattaaataaatccaatatatttttttaaatttttacttcc 538
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aatactaatacacttctattattaaataaatccaatatatttttttaaatttttacttcc 740
Query: 539 cgtcttttcacttctctttggactctttgagttttcctttgttattttgccacattgtgc 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cgtcttttcacttctctttggactctttgagttttcctttgttattttgccacattgtgc 800
Query: 599 tccttctgcctgcaaatatttctcag 624
||||||||||||||||||||||||||
Sbjct: 801 tccttctgcctgcaaatatttctcag 826
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1026
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1016
Effective search space: 623824
Effective search space used: 623824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no137_g20.g1 MSMg01no137_g20.g1 CHROMAT_FILE:
MSMg01no137_g20.g1 PHD_FILE: MSMg01no137_g20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:54:07 2005
(624 letters)
>mm_chr11_38637838_38638861
Length = 1024
Score = 1160 bits (600), Expect = 0.0
Identities = 618/624 (99%)
Strand = Plus / Minus
Query: 1 cttacatttgggatgacctaagtaattaggaacaactagtaaacgataaggggtgggatc 60
||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 824 cttacatttgggatgacctaagtaattaggaacaactagtaaatgataacgggtgggatc 765
Query: 61 aggactgttttcaaacactgctcaagtctggtttaacactttggaaatggattggttgct 120
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 764 aggactgttttcaaacactgatcaagtctggtttaacactttggaaatggattggttgct 705
Query: 121 agggaatcttgtctcctgttgcaaagctgagcatgcagtcctagcctttggcatgcttct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 agggaatcttgtctcctgttgcaaagctgagcatgcagtcctagcctttggcatgcttct 645
Query: 181 ggagtacaacatttgcagggagagcatctgacctgccttgtcaaacaatgcagggtggag 240
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 ggagtacagcatttgcagggagagcatctgacctgccttgtcaaacaatgcagggtggag 585
Query: 241 taaaggctcacaataaataaataaataatcaaaccttcagaggccttttcttggttttcc 300
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 taaaggcacacaataaataaataaataatcaaaccttcagaggccttttcttggttttcc 525
Query: 301 catttaatttttcatttgggttataaatggcatctcagacagatggaagtctcctgggtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 catttaatttttcatttgggttataaatggcatctcagacagatggaagtctcctgggtt 465
Query: 361 tgtcagagttctctgttggcttaatcacgagcatgacacgtgtagaagcgaggcactgag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 tgtcagagttctctgttggcttaatcacgagcatgacacgtgtagaagcgaggcactgag 405
Query: 421 agaattagtgatttcatggacagagggaggatgatcaattattcaccacatgccaccaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 agaattagtgatttcatggacagagggaggatgatcaattattcaccacatgccaccaaa 345
Query: 481 tactagaagcatgaccaccgtttgcctctcatcttctctcctctatacacacaaacaaag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 tactagaagcatgaccaccgtttgcctctcatcttctctcctctatacacacaaacaaag 285
Query: 541 ctcttctcgccagtcagtgcactacggagaaaaatcctccgttcatgcaattctcatttt 600
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 284 ctcttctcgccagtcagtgcacaacggagaaaaatcctccgttcatgcaattctcatttt 225
Query: 601 catcaatgtcattctatcgaactt 624
||||||||||||||||||||||||
Sbjct: 224 catcaatgtcattctatcgaactt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1024
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1014
Effective search space: 622596
Effective search space used: 622596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
