Query= MSMg01no137_h13.b1 MSMg01no137_h13.b1 CHROMAT_FILE:
MSMg01no137_h13.b1 PHD_FILE: MSMg01no137_h13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:54:10 2005
(613 letters)
>mm_chr11_68434668_68435680
Length = 1013
Score = 781 bits (404), Expect = 0.0
Identities = 421/432 (97%), Gaps = 9/432 (2%)
Strand = Plus / Plus
Query: 191 gagaacagatcttaagagagaccccaccttagatcctctgggtgcagcctaatgaaattc 250
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 391 gagaacagatcttaagagagaccccaccttagatcctttgggtgcagcctaatgaaattc 450
Query: 251 ccttctccttgggcttcactcttagctgggcggagcagggggacctgcgcagcacctttg 310
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 451 ccttctccttgggcttcactcttagctgggcggagcagggggacctgcgcagcatctttg 510
Query: 311 gtacttgtcttttgtttctcttctttactttttgttgcagaagtttgcgaatatccccaa 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 gtacttgtcttttgtttctcttctttactttttgttgcagaagtttgcgaatatccccaa 570
Query: 371 acagagagaatagagccggaacctccgtgcccaccgtgctcacttctgctcatcgcttcc 430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 acagagagaatagagccggaacctccgtgcccaccgtgctcacttctgctcatcgcttcc 630
Query: 431 ttctacagacagctctagcttgtccaacctccccatttgatgctcaactgtcttgtactc 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 ttctacagacagctctagcttgtccaacctccccatttgatgctcaactgtcttgtactc 690
Query: 491 tctagggaatctcagttttggcttccaaacaagcagactatgtttgggtcttatgagtct 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 tctagggaatctcagttttggcttccaaacaagcagactatgtttgggtcttatgagtct 750
Query: 551 ttaaaggtc---------ttcacatcaaaggttccccgaggtttggttttagactctgga 601
||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 ttaaaggtccataagttcttcacatcaaaggttccccgaggtttggttttagactctgga 810
Query: 602 taaggggctgag 613
||||||||||||
Sbjct: 811 taaggggctgag 822
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 613
Length of database: 1013
Length adjustment: 10
Effective length of query: 603
Effective length of database: 1003
Effective search space: 604809
Effective search space used: 604809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no137_h13.g1 MSMg01no137_h13.g1 CHROMAT_FILE:
MSMg01no137_h13.g1 PHD_FILE: MSMg01no137_h13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:54:10 2005
(269 letters)
>mm_chr11_68587075_68587743
Length = 669
Score = 466 bits (241), Expect = e-136
Identities = 247/249 (99%)
Strand = Plus / Minus
Query: 21 aattccctctgagcacttctgtaatcaagcaaagatcgtacttgtgtgtgttaagtggca 80
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 aattccctctgagcacttctgtaatcaagcaaagatcgtacttgtgtgtgttaagtggca 410
Query: 81 ctctctccacacatggccccccactgtaagtttcatcctcagtgacccttcatgggctcg 140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 ctctctccacacatggccccccactgtaagtttcatcctcagtgacccttcatgggctcg 350
Query: 141 tgtcactccagccaccatccccaccctcacctacagaatttttatcctaaaacccgatcc 200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 tgtcactccagccaccatccccaccctcacctacagaatttttatcctaaaacccgatcc 290
Query: 201 tctctagttatctgcaactagagaagcatggaaggaggacgctcagagagctgggagaaa 260
||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 289 tctctagttatctgcaactggagaagcacggaaggaggacgctcagagagctgggagaaa 230
Query: 261 agacaaaga 269
|||||||||
Sbjct: 229 agacaaaga 221
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 269
Length of database: 669
Length adjustment: 9
Effective length of query: 260
Effective length of database: 660
Effective search space: 171600
Effective search space used: 171600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
