Query= MSMg01no137_m18.b1 MSMg01no137_m18.b1 CHROMAT_FILE:
MSMg01no137_m18.b1 PHD_FILE: MSMg01no137_m18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:54:37 2005
(530 letters)
>mm_chr11_105951098_105952027
Length = 930
Score = 897 bits (464), Expect = 0.0
Identities = 515/538 (95%), Gaps = 16/538 (2%)
Strand = Plus / Plus
Query: 1 tgcctctgcttcctagttggtagggttacatatgtgagtcgccactcttggcttc-acca 59
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 199 tgcctctgcttcctagttggtagggttacatatgtgagtcgccactcttggcttcaacca 258
Query: 60 ttgtctgttgttgttgttgttgttttttttttttttaactgggtctcatgtggcctacac 119
||||||||||||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 259 ttgtctgttgttgttgttg------ttttttttttaaactgggtctcatgtggcctacac 312
Query: 120 tgggctcaaactaaacttgcccatgaactggtatgcactgtgcttggctgaaccatg-tt 178
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 313 ttggctcaaactaaacttgcccatgaactggtatgcactgtgcttggctgaaccatgttt 372
Query: 179 ttttaaaagtgtg----tctgtgtgagtgtgtgtgcaaga--gtgtgtatgtgcaccaac 232
||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||
Sbjct: 373 ttttaaaagtgtgtctatctgtgtgagtgtgtgtgcaagagtgtgtgtgtgtgcaccaac 432
Query: 233 atgtggaggttaaaggacattttttgtgagtcacttcttttcttccacagtggatctaag 292
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 433 atgtggaggttaaaggacagcttttgtgagtcacttcttttcttccacagtggatctaag 492
Query: 293 cattaggcttgcatggcaagagattttaaaggctgagtccctcacccttgttcttgaaga 352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 cattaggcttgcatggcaagagattttaaaggctgagtccctcacccttgttcttgaaga 552
Query: 353 agaaatttttttggatcgaagatggggtttggttgtgcatacttactgtaaattattttt 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 agaaatttttttggatcgaagatggggtttggttgtgcatacttactgtaaattattttt 612
Query: 413 gccagtgaggaggccagacctgggaggactggcaagtaagtgtggtggggtgcatgctgt 472
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 613 gccagtgaggaggccagacctgggaggactgggaagtaagtgtggtggggtgcatgctgt 672
Query: 473 cagattcccaaacaatcaataaaaaatataatggaaattttttttttttgtctgaata 530
||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||
Sbjct: 673 cagattcccaaacaatcaataaaaa-tataatggaaaatttttttttt-gtctgaata 728
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 530
Length of database: 930
Length adjustment: 10
Effective length of query: 520
Effective length of database: 920
Effective search space: 478400
Effective search space used: 478400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no137_m18.g1 MSMg01no137_m18.g1 CHROMAT_FILE:
MSMg01no137_m18.g1 PHD_FILE: MSMg01no137_m18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:54:37 2005
(587 letters)
>mm_chr11_106061604_106062589
Length = 986
Score = 969 bits (501), Expect = 0.0
Identities = 531/541 (98%), Gaps = 3/541 (0%)
Strand = Plus / Minus
Query: 48 gcactgccactctcaaaaaaaaaggattttgagtaataatagggtgagtggaggtgcccg 107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 986 gcactgccactctcaaaaaaaaaggattttgagtaataatagggtgagtggaggtgcccg 927
Query: 108 gtgtggagttcaaatgcatcagatcccttggagctggaattaaaggcagctgtgaaccac 167
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 926 gtgtggagttcagatgcatcagatcccttggagctggaattaaaggcagctgtgaaccac 867
Query: 168 ctgacagatgcttggaacagagcttgggtcttctgcagaagcatcgtgaggtctaaccac 227
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 866 ctgacagatgcttggaacagagcttgggtcttctgcagaagcatcctgaggtctaaccac 807
Query: 228 caaaccggttccccagcccctgggttttagtgtgtccttagagcttaatttggaccctct 287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 caaaccggttccccagcccctgggttttagtgtgtccttagagcttaatttggaccctct 747
Query: 288 tcccctccctgttacacaggaagctgctttgaggagagaacaaaagaagttggagaagaa 347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 tcccctccctgttacacaggaagctgctttgaggagagaacaaaagaagttggagaagaa 687
Query: 348 gcaaatgaaaatgaaacaaatcaaagtgaaagccatgtagagccggttgcagaggttgtg 407
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 686 gcaaatgaaaatgaaacaaatcaaagtgaaagccatgtagagctggttgcagaggttgtg 627
Query: 408 tccttgctgccgttagctctccgtccaccggagacaggaaaagcacgagtctgcacctaa 467
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 626 tccttgctgccgttagctctccgtccaccggagacaggaaaagcaggagtctgcacctaa 567
Query: 468 cagtcac-atgtctctgctgactgagagatctttatctcaccctctcctcttggttcgga 526
||||||| | ||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 566 cagtcacga-gtctctgctgactgagagatctttatctcaccctctcctctcggtttaga 508
Query: 527 gttctacagaggttatagataacaatgaaagggctctttcagttatttccttccagataa 586
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 507 gttctacagaggttatagata-caatgaaagggctctttcagttatttccttccagataa 449
Query: 587 t 587
|
Sbjct: 448 t 448
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 587
Length of database: 986
Length adjustment: 10
Effective length of query: 577
Effective length of database: 976
Effective search space: 563152
Effective search space used: 563152
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
