Query= MSMg01no138_f12.b1 MSMg01no138_f12.b1 CHROMAT_FILE:
MSMg01no138_f12.b1 PHD_FILE: MSMg01no138_f12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:55:21 2005
(448 letters)
>mm_chr11_86692787_86693631
Length = 845
Score = 777 bits (402), Expect = 0.0
Identities = 424/432 (98%), Gaps = 3/432 (0%)
Strand = Plus / Minus
Query: 17 ctcactcccaactttgaaattcgataccttttcaaccattccaggtgttctcccaccaag 76
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 ctcagtcccaactttgaaattcgataccttttcaaccattccaggtgttctcccaccaag 586
Query: 77 agacccactttgtgctttgtgctacaaagcagtcctcctgaacccatgtctgcctgcccg 136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 agacccactttgtgctttgtgctacaaagcagtcctcctgaacccatgtctgcctgcccg 526
Query: 137 gttctcagctcagtgctgatgcacagcaacactctaagagcttttcttcttttgccaact 196
|||||||||||||||||||||||||||||||||| | |||||||||||||||||| ||||
Sbjct: 525 gttctcagctcagtgctgatgcacagcaacactccacgagcttttcttcttttgctaact 466
Query: 197 ccacccactgctccaagaacggaaccttgaccttctgcaatgggtacactccagctcctt 256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 ccacccactgctccaagaacggaaccttgaccttctgcaatgggtacactccagctcctt 406
Query: 257 aggtgccacgcattgactgcatcatcggctggggaggcctcatctgcaggctggcttccc 316
|||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 405 aggtgccacgcattgactgcatcagcggctggg-aggcctcatctgcaggctggcttccc 347
Query: 317 catctgcagggagttgctccccaggaagccgctgggaaggcacaagtgcctaccttcaat 376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 catctgcagggagttgctccccaggaagccgctgggaaggcacaagtgcctaccttcaat 287
Query: 377 gtcagagacagcatctgactcatttgtactcagagaaaagcacaccaccttgggatccta 436
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 gtcaga--cagcatctgactcatttgtactcagagaaaagcacaccaccttgggatccta 229
Query: 437 tgtcagtcccac 448
||||||||||||
Sbjct: 228 tgtcagtcccac 217
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 448
Length of database: 845
Length adjustment: 10
Effective length of query: 438
Effective length of database: 835
Effective search space: 365730
Effective search space used: 365730
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no138_f12.g1 MSMg01no138_f12.g1 CHROMAT_FILE:
MSMg01no138_f12.g1 PHD_FILE: MSMg01no138_f12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:55:21 2005
(453 letters)
>mm_chr11_86569727_86570579
Length = 853
Score = 870 bits (450), Expect = 0.0
Identities = 450/450 (100%)
Strand = Plus / Plus
Query: 1 cacgcagtcctgtgagacatactcctgccgtaatcccacaactacctgctaaattccaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacgcagtcctgtgagacatactcctgccgtaatcccacaactacctgctaaattccaaa 260
Query: 61 aggccataaataacctctaaataactctccctacctgcaagaatcaaagtgagcctaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggccataaataacctctaaataactctccctacctgcaagaatcaaagtgagcctaaga 320
Query: 121 gctacactaaccctctgaagaaaccaagaaaggaaaaatatgcgcgttccccttgggacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gctacactaaccctctgaagaaaccaagaaaggaaaaatatgcgcgttccccttgggacc 380
Query: 181 ttgaccccaggcaccgagactgacaccgccccttgccgcccctctatcttctttctgttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgaccccaggcaccgagactgacaccgccccttgccgcccctctatcttctttctgttc 440
Query: 241 cttcagtgagtgtgaccttcggttccttatagattcagggaaggcaagccacgagccact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cttcagtgagtgtgaccttcggttccttatagattcagggaaggcaagccacgagccact 500
Query: 301 gctaccctaaccccaaggtgcctttctcagtggtgagctgcagagggaggatgcagctcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gctaccctaaccccaaggtgcctttctcagtggtgagctgcagagggaggatgcagctcc 560
Query: 361 tccccaacccacccgccacacaattcctgggtgcagactcgatgtagaaatgggaataga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tccccaacccacccgccacacaattcctgggtgcagactcgatgtagaaatgggaataga 620
Query: 421 ccaagggaaggtgacagccccgcgtcgctc 450
||||||||||||||||||||||||||||||
Sbjct: 621 ccaagggaaggtgacagccccgcgtcgctc 650
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 453
Length of database: 853
Length adjustment: 10
Effective length of query: 443
Effective length of database: 843
Effective search space: 373449
Effective search space used: 373449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|