Query= MSMg01no139_g18.b1 MSMg01no139_g18.b1 CHROMAT_FILE:
MSMg01no139_g18.b1 PHD_FILE: MSMg01no139_g18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:56:49 2005
(637 letters)
>mm_chr11_98876987_98878023
Length = 1037
Score = 617 bits (319), Expect = 0.0
Identities = 322/323 (99%)
Strand = Plus / Minus
Query: 4 ggaattcatgatcatccctgtcaactgcacaatttgttttccacccacatttttcttatt 63
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ggaattcatgatcatcactgtcaactgcacaatttgttttccacccacatttttcttatt 264
Query: 64 cccagataaggtggggaaaaaaaaagactatctcattttaatcttagtgaagggaatctg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 cccagataaggtggggaaaaaaaaagactatctcattttaatcttagtgaagggaatctg 204
Query: 124 ttttgttttttagataggctgtcactgtatagctctggttaacctacaattccactatgt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 ttttgttttttagataggctgtcactgtatagctctggttaacctacaattccactatgt 144
Query: 184 agaccaggctagccttttttcttttttttctagacagggtttctctgtgtagtcctggct 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 agaccaggctagccttttttcttttttttctagacagggtttctctgtgtagtcctggct 84
Query: 244 gtcctggaactccctctgtagaccaggctggcctcaaactcagagattcgcctgcctctg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 gtcctggaactccctctgtagaccaggctggcctcaaactcagagattcgcctgcctctg 24
Query: 304 tctcccgagtgctgggattaaag 326
|||||||||||||||||||||||
Sbjct: 23 tctcccgagtgctgggattaaag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1037
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1027
Effective search space: 643929
Effective search space used: 643929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no139_g18.g1 MSMg01no139_g18.g1 CHROMAT_FILE:
MSMg01no139_g18.g1 PHD_FILE: MSMg01no139_g18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:56:49 2005
(520 letters)
>mm_chr11_98731117_98732038
Length = 922
Score = 984 bits (509), Expect = 0.0
Identities = 516/519 (99%), Gaps = 2/519 (0%)
Strand = Plus / Plus
Query: 1 aatagcaaacgatacatgaagctgagcatgttgactcctgcctgcagtgtcagcgctcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatagcaaacgatacatgaagctgagcatgttgactcctgcctgcagtgtcagcgctcca 260
Query: 61 ggggcaaagacagagggttgagtttaaggtcagcttgagctgttgagcaagatccaaggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggggcaaagacagagggttgagtttaaggtcagcttgagctgttgagcaagatccaaggc 320
Query: 121 ttagctccgtggtaggacgctaacctaacaagcacaaggaatactcagcacttggggaag 180
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 321 ttagctccgtggtaggacgctaacctaacaagcacaaggaacactcagcacttggggaag 380
Query: 181 tatatatata--gcctacctttgacttgcctttagcccaggccactggtccatctctaca 238
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tatatatatatagcctacctttgacttgcctttagcccaggccactggtccatctctaca 440
Query: 239 ggggttgggaactgcctgacatgggtgctggaactcgaactcagatcttcttacaagagc 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggggttgggaactgcctgacatgggtgctggaactcgaactcagatcttcttacaagagc 500
Query: 299 agtgtgttctctcaatagctgatccttctctgcagcctgaggctacaccgttaagactac 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agtgtgttctctcaatagctgatccttctctgcagcctgaggctacaccgttaagactac 560
Query: 359 ctggatcttttgttgtttcatttttttgtttgtttgtttgtttttcccttcatgaatttg 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctggatcttttgttgtttcatttttttgtttgtttgtttgtttttcccttcatgaatttg 620
Query: 419 gatgaactccttgtgcagagaccatgctaatctctgtcctgatctaattttagtgtgtgt 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gatgaactccttgtgcagagaccatgctaatctctgtcctgatctaattttagtgtgtgt 680
Query: 479 gctgctgaagggagcatgtgttttgttgttgttgttgtt 517
|||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gctgctgaagggagcatgtgttttgttgttgttgttgtt 719
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 520
Length of database: 922
Length adjustment: 10
Effective length of query: 510
Effective length of database: 912
Effective search space: 465120
Effective search space used: 465120
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
