Query= MSMg01no140_k23.b1 MSMg01no140_k23.b1 CHROMAT_FILE:
MSMg01no140_k23.b1 PHD_FILE: MSMg01no140_k23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:58:29 2005
(421 letters)
>mm_chr11_78789974_78790794
Length = 821
Score = 787 bits (407), Expect = 0.0
Identities = 418/423 (98%), Gaps = 4/423 (0%)
Strand = Plus / Minus
Query: 1 ggtcttctggcctcctgagtccctagtcaggaccctgaggtctttggtgaacttgggttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggtcttctggcctcctgagtccctagtcaggaccctgaggtctttggtgaacttgggttg 562
Query: 61 aggccagcagccttcaccacaattctcattcctaaccttgtatgctgtttccttctggta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aggccagcagccttcaccacaattctcattcctaaccttgtatgctgtttccttctggta 502
Query: 121 ggttctacagctgtcacctcctacagactggggaagataaaggcttgaggtcacttgctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggttctacagctgtcacctcctacagactggggaagataaaggcttgaggtcacttgctg 442
Query: 181 gccaagcctcagaaacctggtggtcttctgatcatttcagaaggaccatgaaactagatt 240
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 441 gccaagcctcagaaacctggtggtcttctgatcatttcagaaggaccgtgaaactagatt 382
Query: 241 gggcctgcctctacgagggaccccct--gttctgtgtggctgggattctagttccttggt 298
|||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||
Sbjct: 381 gggcctgcctctacgaggga--ccctaagttctgtgtggctgggattctagttccttggt 324
Query: 299 ggccatgccctaacagggtccctggccctaactgggtactgtcacaccaggcgaatgtca 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ggccatgccctaacagggtccctggccctaactgggtactgtcacaccaggcgaatgtca 264
Query: 359 gccaactgatatctctctatttcccccctgcagatcatcccctttactggaccaatccaa 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gccaactgatatctctctatttcccccctgcagatcatcccctttactggaccaatccaa 204
Query: 419 gga 421
|||
Sbjct: 203 gga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 421
Length of database: 821
Length adjustment: 9
Effective length of query: 412
Effective length of database: 812
Effective search space: 334544
Effective search space used: 334544
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no140_k23.g1 MSMg01no140_k23.g1 CHROMAT_FILE:
MSMg01no140_k23.g1 PHD_FILE: MSMg01no140_k23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:58:29 2005
(341 letters)
>mm_chr11_78659767_78660507
Length = 741
Score = 630 bits (326), Expect = 0.0
Identities = 338/342 (98%), Gaps = 2/342 (0%)
Strand = Plus / Plus
Query: 1 aagatgattcaagaggaaaagttaaggacattgatttatctctctgcctccaaaatccag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagatgattcaagaggaaaagttaaggacattgatttatctctctgcctccaaaatccag 260
Query: 61 acaccaaatgaaacagagatgccaggcttttattagtaaatgaacctagtctggggtcat 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 261 acaccaaatgaaacagagatgccaggcttttattagtaaatgaacctagcctggggtcat 320
Query: 121 aggctctttcccgagaagctgggtttgaccatctgtcttccagaagcaaacta-ccaaat 179
||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 321 aggctctttcccgagaagctgggtttgaccatctgtcttccagaagcaaac-agccaaat 379
Query: 180 tcatagcaaaaatcagaaaaagatgggaactagagagatgtcgcagtggttaacagtgct 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tcatagcaaaaatcagaaaaagatgggaactagagagatgtcgcagtggttaacagtgct 439
Query: 240 tgcggctctttccagaagacctggctttggtcacaacactgacaccagatgactcacaac 299
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 440 tgcggctctttccagaagacctggctttggttacaacactgacaccagatgactcacaac 499
Query: 300 cacccgcaactccagttctgatgccctcttctggcccctgtg 341
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 cacccgcaactccagttctgatgccctcttctggcccctgtg 541
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 341
Length of database: 741
Length adjustment: 9
Effective length of query: 332
Effective length of database: 732
Effective search space: 243024
Effective search space used: 243024
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
