Query= MSMg01no141_i20.b1 MSMg01no141_i20.b1 CHROMAT_FILE:
MSMg01no141_i20.b1 PHD_FILE: MSMg01no141_i20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:00:05 2005
(541 letters)
>mm_chr11_79451422_79452362
Length = 941
Score = 801 bits (414), Expect = 0.0
Identities = 432/438 (98%)
Strand = Plus / Minus
Query: 1 caagcttggagccccagatcaggacagagatgggagctctaaagagagaggctctatcct 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 caagcttggagcaggagatcaggacagagatgggagctctaaagagagaggctctatcct 379
Query: 61 ttcccagaggctgagtgccccaagtctcctggagctaagctcccgcccacagtcaggaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 ttcccagaggctgagtgccccaagtctcctggagctaagctcccgcccacagtcaggaca 319
Query: 121 ggggccctgcaggtagggaagggcagccacctgccctacatcagcccaacattggcagta 180
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 318 ggggccctgcaggtagggaagggcagccacctgccctacatcagcccaacactggcagta 259
Query: 181 cagctccaacctgccactgtcttagaacactttagcttagattaagaacttccttctgga 240
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 258 cagctccaacctgccactgtcttagaatactttagcttagattaagaacttccttctgga 199
Query: 241 aatggctcagtaaccactgagcactggctgttcttctagaggtcctgatttcagttccca 300
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 198 aatggctcagtaaccactgagcactggctgttcttctagaggtcctgagttcagttccca 139
Query: 301 gcaaccacatggtggctcacaaccattcctgactttagttctgggggatctgatcccctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 gcaaccacatggtggctcacaaccattcctgactttagttctgggggatctgatcccctc 79
Query: 361 ttctgccctccttgggcactgcacacacgaggtatgggaacgtacgtgtaaatgaaatac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 ttctgccctccttgggcactgcacacacgaggtatgggaacgtacgtgtaaatgaaatac 19
Query: 421 tcacacatataaaattaa 438
||||||||||||||||||
Sbjct: 18 tcacacatataaaattaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 541
Length of database: 941
Length adjustment: 10
Effective length of query: 531
Effective length of database: 931
Effective search space: 494361
Effective search space used: 494361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no141_i20.g1 MSMg01no141_i20.g1 CHROMAT_FILE:
MSMg01no141_i20.g1 PHD_FILE: MSMg01no141_i20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:00:05 2005
(650 letters)
>mm_chr11_79340070_79341115
Length = 1046
Score = 1170 bits (605), Expect = 0.0
Identities = 638/651 (98%), Gaps = 6/651 (0%)
Strand = Plus / Plus
Query: 1 aatttgacatctgcttggctctaaggcccttaaa-gaactcttccaaccccaagtacatt 59
|||||||||||||||||||||||||| | ||||| |||||||||||| ||||||||||
Sbjct: 201 aatttgacatctgcttggctctaagggc-ttaaaagaactcttccaagttcaagtacatt 259
Query: 60 cagacagaggtcattcactgctgaacaggaatgtttaattacctcatgttatttctatta 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 cagacagaggtcattcactgctgaacaggaatgtttaattacctcatgttatttctatta 319
Query: 120 gtttctttagctgctgttgttttacttactttcttaaaaatatgaagtacgaaacagata 179
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 320 gtttctttagctgctgttgttttactt----tcttaaaaatatgaagtacgaaacagata 375
Query: 180 taaaccttgagcaagcatacatctccctttctggtctgacgctaaacaaagagcatgtca 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 taaaccttgagcaagcatacatctccctttctggtctgacgctaaacaaagagcatgtca 435
Query: 240 gactttggatcatctgagcaaacgtggatgggaaataccaccagccagctttatttctaa 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 gactttggatcatctgagcaaacgtggatgggaaataccaccagccagctttatttctaa 495
Query: 300 ctccgccttcctcattgctgttttgcatttccctttccaacccacagcctagttgagttt 359
||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 496 ctctgccttcctcattgctgctttgcatttccctttccaacccacagcctagttgagttt 555
Query: 360 ttcagttccttcttcgtgctttctctccctggctgctgtaagcacaccaggagattgcaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 ttcagttccttcttcgtgctttctctccctggctgctgtaagcacaccaggagattgcaa 615
Query: 420 taggaggttggagcctgtgaactcctttgctcttttccaagtgtccgactcagcagtcca 479
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 616 taggaggttggagcctgtgagctcctttgctcttttccaagtgtccgactcagcagtcca 675
Query: 480 gagcccactacttgccagaaagtcaccgttgctccgcggctggcgcttgcctacttgctt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 gagcccactacttgccagaaagtcaccgttgctccgcggctggcgcttgcctacttgctt 735
Query: 540 tgaccttttgagagatgagactttgtttgccagaaccacagttgatagaaatagaaaggt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 tgaccttttgagagatgagactttgtttgccagaaccacagttgatagaaatagaaaggt 795
Query: 600 acagataaggaaaagcactgcaattacaattaagcaaattagcatggccgt 650
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 acagataaggaaaagcactgcaattacaattaagcaaattagcatggccgt 846
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 650
Length of database: 1046
Length adjustment: 10
Effective length of query: 640
Effective length of database: 1036
Effective search space: 663040
Effective search space used: 663040
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
