Query= MSMg01no143_g24.b1 MSMg01no143_g24.b1 CHROMAT_FILE:
MSMg01no143_g24.b1 PHD_FILE: MSMg01no143_g24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:04:00 2005
(298 letters)
>mm_chr11_51440757_51441454
Length = 698
Score = 561 bits (290), Expect = e-164
Identities = 296/298 (99%)
Strand = Plus / Plus
Query: 1 agaataccagggactgactgaaaactagcagatgaatgcagtgggctgggcacggtagtg 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 agaataccagggactgactgaaaactagcagatgaatgcagtgggctgggcatggtagtg 260
Query: 61 tgccacacccataatcccagaatttaggagactgagaaatgaggctagcctgggttacat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgccacacccataatcccagaatttaggagactgagaaatgaggctagcctgggttacat 320
Query: 121 aagcaagcctgtctcaaacagcaggagatgagtgccttgtgcattacctggcacagctcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagcaagcctgtctcaaacagcaggagatgagtgccttgtgcattacctggcacagctcc 380
Query: 181 tccgctacactgagcatgccttgctggtacaggtgctctacgatggccatctgcaggatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tccgctacactgagcatgccttgctggtacaggtgctctacgatggccatctgcaggatc 440
Query: 241 tgctgctgcttctctcgggagtcccacacagcatccgagaccacgccgcagatctcag 298
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgctgctgcttctcacgggagtcccacacagcatccgagaccacgccgcagatctcag 498
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 298
Length of database: 698
Length adjustment: 9
Effective length of query: 289
Effective length of database: 689
Effective search space: 199121
Effective search space used: 199121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no143_g24.g1 MSMg01no143_g24.g1 CHROMAT_FILE:
MSMg01no143_g24.g1 PHD_FILE: MSMg01no143_g24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:04:00 2005
(207 letters)
>mm_chr11_51593588_51594193
Length = 606
Score = 368 bits (190), Expect = e-106
Identities = 202/206 (98%), Gaps = 1/206 (0%)
Strand = Plus / Minus
Query: 1 gccagggctacacagagaaaccctgactcgggaaaaaacaaacagaactatctgtgggat 60
|||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct: 448 gccagggctacagagagaaaccctgactcgggaaaaaacaaaaagaactatct-tgggat 390
Query: 61 aagtgaagggatcagtcccagcaaagagaagtaaaactactcgataatctcttctaactc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 aagtgaagggatcagtcccagcaaagagaagtaaaactactcgataatctcttctaactc 330
Query: 121 tgccatgctccccctccctttttaaaagaagactcgagctctcataaaatattatgtatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 329 tgccatgctccccctccctttttaaaagaagactcgagctctcataaaatattatttatt 270
Query: 181 tttattttatgtatgtgcaggtgtgt 206
||||||||||||||||||||||||||
Sbjct: 269 tttattttatgtatgtgcaggtgtgt 244
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 207
Length of database: 606
Length adjustment: 9
Effective length of query: 198
Effective length of database: 597
Effective search space: 118206
Effective search space used: 118206
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
