Query= MSMg01no143_i10.b1 MSMg01no143_i10.b1 CHROMAT_FILE:
MSMg01no143_i10.b1 PHD_FILE: MSMg01no143_i10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:04:06 2005
(459 letters)
>mm_chr11_52923232_52924090
Length = 859
Score = 783 bits (405), Expect = 0.0
Identities = 445/465 (95%), Gaps = 14/465 (3%)
Strand = Plus / Minus
Query: 2 gaattccaataaagctgccttatgtgtgtgccagtggtggggctgtggtagacgtacaat 61
|||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 659 gaattccaataaagctgcattatgcgtgtgccagtggtggggctgtggtagacgtacaat 600
Query: 62 ggatggagactgtgaaggctgatgccctgccaacacctgctgatcttcagaacattcttg 121
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 599 ggatggagactgtgaaggctgatgccctgccaacacctgctgaccttcagaacattcttg 540
Query: 122 gtctccagggtaactgtgggaatgcaattacttccttgggctctgagcttgccag-ttgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 539 gtctccagggtaactgtgggaatgcaattacttccttgggctctgagcttgccaggttgg 480
Query: 181 gggagaagaatctagtggccctaggaggtacttacaactcatagtggcccccgcccacct 240
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 479 gggagaagaatctagtggccctaggag-tacttacaactcatagtggcccccgcccacct 421
Query: 241 tcccccaacccttagacaatggcagcttcatttctgtgacttatcagaaagctgacctct 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 420 tcccccaacccttagacaatggcagcttcatttctgtgacttatcagaaagctggcctct 361
Query: 301 tcttcgggagcctcagacttactcaatctcctctgtgtattaaaggcactttccaagatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 tcttcgggagcctcagacttactcaatctcctctgtgtattaaaggcactttccaagatc 301
Query: 361 tattctcaccccccc------acaatttttacagctttgctttaggaagctccagaccct 414
||||||||| | |||||||||||||||| ||||||||||||||||||||
Sbjct: 300 tattctcac------ttgaggagaatttttacagctttgttttaggaagctccagaccct 247
Query: 415 tagcctgggaaggcatcctggaggggagtcgtggggcatcacagg 459
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 tagcctgggaaggcatcctggaggggagtcgtggggcatcacagg 202
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 459
Length of database: 859
Length adjustment: 10
Effective length of query: 449
Effective length of database: 849
Effective search space: 381201
Effective search space used: 381201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no143_i10.g1 MSMg01no143_i10.g1 CHROMAT_FILE:
MSMg01no143_i10.g1 PHD_FILE: MSMg01no143_i10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:04:07 2005
(240 letters)
>mm_chr11_52765842_52766481
Length = 640
Score = 441 bits (228), Expect = e-128
Identities = 237/240 (98%)
Strand = Plus / Plus
Query: 1 tgggccccgtctgaatgctgtgtgtgaaggcagaagaaagactcttgcagaatgtacagg 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 201 tgggccccgtctgaatgctgtgtgtgaaggcagaagaaaggctcttgcagaatgtacagg 260
Query: 61 agctcagaaatcctagctttctgctctttcttatttgaaaagtagtgttcgtctttgcac 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 261 agctcagaaatcctagctttctgctctttcttatttgaaaagtagtgtttgtctttgcac 320
Query: 121 gctacacaattgatgaatgaaccaaacaacccaggaagggaaagtgtcacagaagaatag 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actacacaattgatgaatgaaccaaacaacccaggaagggaaagtgtcacagaagaatag 380
Query: 181 tcacgagattcaaaatcagtcagtaatgaaattaaagtatgtgtaattagggaggtatgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcacgagattcaaaatcagtcagtaatgaaattaaagtatgtgtaattagggaggtatgt 440
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 640
Length adjustment: 9
Effective length of query: 231
Effective length of database: 631
Effective search space: 145761
Effective search space used: 145761
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
