Query= MSMg01no144_d19.b1 MSMg01no144_d19.b1 CHROMAT_FILE:
MSMg01no144_d19.b1 PHD_FILE: MSMg01no144_d19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:05:00 2005
(597 letters)
>mm_chr11_79044518_79045512
Length = 995
Score = 1081 bits (559), Expect = 0.0
Identities = 587/597 (98%), Gaps = 2/597 (0%)
Strand = Plus / Minus
Query: 1 tataaaatgccaagtgccaatcagtatttccagccctggcgagacattcctggaactcac 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 967 tataaaatgccaagtgccaatcagtatttccagccctggcgagacattcctggagctcac 908
Query: 61 tggccagtcattctacccaaatcaggggagagaccctgtctaaagaaatgcagtggaggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 907 tggccagtcattctacccaaatcaggggagagaccctgtctaaagaaatgcagtggaggg 848
Query: 121 ctgtcagagaagacactcaaatgctgcccgtgaccccacataatcacacatagtgaagtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 847 ctgtcagagaagacactcaaatgctgcccgtgaccccacataatcacacatagtgaagtt 788
Query: 181 ctctacctgtgcaataaaggggaaactataaagtcatctactgcaggtccagaagactga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 ctctacctgtgcaataaaggggaaactataaagtcatctactgcaggtccagaagactga 728
Query: 241 agtggctatcccagtaggttgtgtttcccagttgttgatggataatgccgtgttatgatg 300
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 727 agtggctatcccagtaggt--tgtttcccagttgttgatggataatgccgtgttatgatg 670
Query: 301 cagtggagagtatgcattgttactcagcactgcaggctgaggtgacccacccactatcac 360
||||||||||||||| ||||||||||||||||||||||||||||| || |||||||||
Sbjct: 669 cagtggagagtatgcgttgttactcagcactgcaggctgaggtgagtcagtcactatcac 610
Query: 361 ggagggtgaggaggcctgagagtgaggatatggaacagagccaggaccgaggcaaatgta 420
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 609 ggagggtgaggaggcctgagagtgaggatatggaacagagtcaggaccgaggcaaatgta 550
Query: 421 aacagagccacggggccctaaacacaaaagcgaaatcagaaagttgcatggtcctgtgtc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 aacagagccacggggccctaaacacaaaagcgaaatcagaaagttgcatggtcctgtgtc 490
Query: 481 catcctgacagtgactaaggaaaaggacaggatacgttaggaagtggatcctaaccacca 540
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 489 catcctgacagtgactaaggaaaaggacgggatacgttaggaagtggatcctaaccacca 430
Query: 541 atccgttaacatgtggtgttgttcatcctgatgagatgacattagcaagtgaggact 597
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 atccgttaacatgtggtgttgttcatcctgatgagatgacattagcaagtgaggact 373
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 597
Length of database: 995
Length adjustment: 10
Effective length of query: 587
Effective length of database: 985
Effective search space: 578195
Effective search space used: 578195
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no144_d19.g1 MSMg01no144_d19.g1 CHROMAT_FILE:
MSMg01no144_d19.g1 PHD_FILE: MSMg01no144_d19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:05:00 2005
(606 letters)
>mm_chr11_78900701_78901706
Length = 1006
Score = 1110 bits (574), Expect = 0.0
Identities = 598/606 (98%)
Strand = Plus / Plus
Query: 1 cagccagcgaggccccaggaccaggatcctcttatttctgtctccccagctctggcatcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagccagcgaggccccaggaccaggatcctcttatttctgtctccccagctctggcatcc 260
Query: 61 aagctctttatgtgggtgctagggatctgaattcagatccccaccattgcgtggcaaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagctctttatgtgggtgctagggatctgaattcagatccccaccattgcgtggcaaaca 320
Query: 121 tttttctgattgagccatcttcccagccctgctagataatttttacaagacaaagagtct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttttctgattgagccatcttcccagccctgctagataatttttacaagacaaagagtct 380
Query: 181 cactatgtagcctacctaagctggtttcagactctcagttctcttgcctgagccttcaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cactatgtagcctacctaagctggtttcagactctcagttctcttgcctgagccttcaaa 440
Query: 241 gtgctggtattataggcatgcagtatgccaccatgcctgtctcagctactttgaagtcac 300
||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 441 gtgctgggattataggcatgcagtgtgccaccatgcctgtctcagctactttgaagtcac 500
Query: 301 agatcaagggctgatcgataaagcatccgagtgctaatttaccgccctactctattgtct 360
|||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||
Sbjct: 501 agatcaagggctgatctataaagcatccgagtgctaatttactgaagtactctattgtct 560
Query: 361 catgtagggatgcaagtcagactcagagatgaggtagccagtggaggaggaggaggagaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 catgtagggatgcaagtcagactcagagatgaggtagccagtggaggaggaggaggagaa 620
Query: 421 cccagatgatgtcaccctgttgtgccagccaggcttcttagttggagttctcagcttgct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cccagatgatgtcaccctgttgtgccagccaggcttcttagttggagttctcagcttgct 680
Query: 481 cctagccactccagagaggcggggctgaggtcaggctgaaggcagctcccatctcagcag 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 681 cctagccactccagagaggcggggctgaggtcaggctgaaggcagctcccatctcaacag 740
Query: 541 cccagggagtgtcccccaaagagtcatcaagaagacactaggaatggatttccccctaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cccagggagtgtcccccaaagagtcatcaagaagacactaggaatggatttccccctaaa 800
Query: 601 gcagag 606
||||||
Sbjct: 801 gcagag 806
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 606
Length of database: 1006
Length adjustment: 10
Effective length of query: 596
Effective length of database: 996
Effective search space: 593616
Effective search space used: 593616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
