Query= MSMg01no144_h07.b1 MSMg01no144_h07.b1 CHROMAT_FILE:
MSMg01no144_h07.b1 PHD_FILE: MSMg01no144_h07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:05:17 2005
(577 letters)
>mm_chr11_117009960_117010936
Length = 977
Score = 1069 bits (553), Expect = 0.0
Identities = 571/577 (98%), Gaps = 2/577 (0%)
Strand = Plus / Minus
Query: 2 ggaattcacttgca-tttcggctcccagggccatgcagaatggtaggtacatcaggctga 60
|||||||||||||| | | |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 777 ggaattcacttgcagtct-ggctcccagggccatgcagactggtaggtacatcaggctga 719
Query: 61 caacccagccattgacctcagcacttgctttttaaccttctagaacgtgtggtaaacggt 120
|||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 caaccctgccattgaccgcagcacttgctttttaaccttctagaacgtgtggtaaacggt 659
Query: 121 accatcaggctgtggggccaagagcaacggaaggaagttgatttagctcctgttctttac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 accatcaggctgtggggccaagagcaacggaaggaagttgatttagctcctgttctttac 599
Query: 181 atgctggagagagccaaggccacccacctgattggccggccgaagaccttggtgttttcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 atgctggagagagccaaggccacccacctgattggccggccgaagaccttggtgttttcc 539
Query: 241 tcgcatcgtctcaggccttcttcgtttatggaaagaacctgtaagcaaaggccgtgacgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 tcgcatcgtctcaggccttcttcgtttatggaaagaacctgtaagcaaaggccgtgacgg 479
Query: 301 caagggtcagtcccagaaggcaaaggtgacatcagactccacagaggggaattaaggcaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 caagggtcagtcccagaaggcaaaggtgacatcagactccacagaggggaattaaggcaa 419
Query: 361 gatgacaggtgcacgtgggacctcaagcactgtcctcacaccccacacggcaacaacaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 gatgacaggtgcacgtgggacctcaagcactgtcctcacaccccacacggcaacaacaaa 359
Query: 421 catttcccttgcagagaatagacaggagcagccacagcagacaaagcaggtggccctaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 catttcccttgcagagaatagacaggagcagccacagcagacaaagcaggtggccctaag 299
Query: 481 aaagtggcagttcaagtcacctgggcactgattgatatgggggtgtttgcagaacaggct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 aaagtggcagttcaagtcacctgggcactgattgatatgggggtgtttgcagaacaggct 239
Query: 541 cgtttgggatagtaggagggggagagagagagtctga 577
|||||||||||||||||||||||||||||||||||||
Sbjct: 238 cgtttgggatagtaggagggggagagagagagtctga 202
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 577
Length of database: 977
Length adjustment: 10
Effective length of query: 567
Effective length of database: 967
Effective search space: 548289
Effective search space used: 548289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no144_h07.g1 MSMg01no144_h07.g1 CHROMAT_FILE:
MSMg01no144_h07.g1 PHD_FILE: MSMg01no144_h07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:05:18 2005
(415 letters)
>mm_chr11_116851196_116852010
Length = 815
Score = 772 bits (399), Expect = 0.0
Identities = 411/415 (99%)
Strand = Plus / Plus
Query: 1 aattctcgaggcgtgtctaaactccagagaccctgaaatttccatttcattttaatagta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aattctcgaggcgtgtctaaactccagagaccctgaaatttccatttcattttaatagta 260
Query: 61 ccaaactggagccatgctagggtgtggtagcctttcccgtaatcccagcacagagcaaac 120
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 261 ccaaactggagccatgctagggtgtggtagccttgcccgtaatcccagcacagagcaaac 320
Query: 121 agaggcaggaagatcgggagttcagggttatcctcagctacacagcaagtcggaagccag 180
||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 321 agaggcaggaagatccggagttcagggttattctcagctacacagcaagtcggaagccag 380
Query: 181 cctgggctacgtgaggatctgcaaaagcccaaaatcaacgcagcccagagggaacggagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cctgggctacgtgaggatctgcaaaagcccaaaatcaacgcagcccagagggaacggagt 440
Query: 241 cagctttaattctggaaacttccaaacagctgtcttggccttggaagtgctgtttctgtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cagctttaattctggaaacttccaaacagctgtcttggccttggaagtgctgtttctgtc 500
Query: 301 tgcccattcattcatccattcatcaattaaaaagcaatttctgagcacatagcccagctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgcccattcattcatccattcatcaattaaaaagcaatttctgagcacatagcccagctg 560
Query: 361 gccctgtgttgaagctggaaaaaagctctcagtccctcaactcccggagcagagc 415
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 561 gccctgtgttgaagctggaaaagagctctcagtccctcaactcccggagcagagc 615
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 415
Length of database: 815
Length adjustment: 9
Effective length of query: 406
Effective length of database: 806
Effective search space: 327236
Effective search space used: 327236
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
