Query= MSMg01no145_e07.b1 MSMg01no145_e07.b1 CHROMAT_FILE:
MSMg01no145_e07.b1 PHD_FILE: MSMg01no145_e07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:06:18 2005
(375 letters)
>mm_chr11_86403882_86404656
Length = 775
Score = 696 bits (360), Expect = 0.0
Identities = 366/368 (99%)
Strand = Plus / Minus
Query: 5 gaattccatgaaagtagcgaggcgtggtgccgggtggttctagtgcacttggattgagtg 64
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 gaattccatgaaaggagggaggcgtggtgccgggtggttctagtgcacttggattgagtg 429
Query: 65 cgacttctgcatgaagcgacaaatagagctgtgtgcattgtggaatacttaccccaccca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 cgacttctgcatgaagcgacaaatagagctgtgtgcattgtggaatacttaccccaccca 369
Query: 125 ctcttcaacagactcccccagctctgcagcttcctcgggagatctgagaacaaaatgacg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ctcttcaacagactcccccagctctgcagcttcctcgggagatctgagaacaaaatgacg 309
Query: 185 caagcctttatgagtaaagatgaggagagttcagaatgcatattcttgctagatatatga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 caagcctttatgagtaaagatgaggagagttcagaatgcatattcttgctagatatatga 249
Query: 245 tttagacaaatagagttaaacgtttctaaaactattttaaaaataaagatttggccgggc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 tttagacaaatagagttaaacgtttctaaaactattttaaaaataaagatttggccgggc 189
Query: 305 ggtggtggcgcacgcctttaatcccagcactcgggaggcagaggcaggcaggtggatttc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtggtggcgcacgcctttaatcccagcactcgggaggcagaggcaggcaggtggatttc 129
Query: 365 tgagtgca 372
||||||||
Sbjct: 128 tgagtgca 121
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 375
Length of database: 775
Length adjustment: 9
Effective length of query: 366
Effective length of database: 766
Effective search space: 280356
Effective search space used: 280356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no145_e07.g1 MSMg01no145_e07.g1 CHROMAT_FILE:
MSMg01no145_e07.g1 PHD_FILE: MSMg01no145_e07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:06:18 2005
(288 letters)
>mm_chr11_86234033_86234720
Length = 688
Score = 514 bits (266), Expect = e-150
Identities = 283/289 (97%), Gaps = 2/289 (0%)
Strand = Plus / Plus
Query: 1 gccatttcgataactctagagaggcgaatgctttaagcattgactcatctccgtgtgcga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gccatttcgataactctagagaggcgaatgctttaagcattgactcatctccgtgtgcga 260
Query: 61 gagcgcttggcactggaggatgctttaatagctatcactctgcagagcagatgtttgtat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagcgcttggcactggaggatgctttaatagctatcactctgcagagcagatgtttgtat 320
Query: 121 gtttcattcgtgggcatcataaatattaagggcgatgcttgaaaagcatttcccattatt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 321 gtttcattcgtgggcatcataaatattaagggcgatgcttgaaaagcatttcccattaat 380
Query: 181 tgttaatgttcaccgcgtggatgaaagaggggaaaatccttgggggagaatcaagtccat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgttaatgttcaccgcgtggatgaaagaggggaaaatccttgggggagaatcaagtccat 440
Query: 241 tttt-tngtcnattattccagtatttcaattgcagggccgaagctgggg 288
|||| | ||| | |||||||||||||||||||||||||||||||||||
Sbjct: 441 ttttat-gtctaacattccagtatttcaattgcagggccgaagctgggg 488
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
