Query= MSMg01no146_a07.b1 MSMg01no146_a07.b1 CHROMAT_FILE:
MSMg01no146_a07.b1 PHD_FILE: MSMg01no146_a07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:07:17 2005
(580 letters)
>mm_chr11_79492612_79493591
Length = 980
Score = 1017 bits (526), Expect = 0.0
Identities = 555/570 (97%), Gaps = 10/570 (1%)
Strand = Plus / Plus
Query: 16 atgtagctcagtgactttggagccgtgtgtggttcaacccttggagcgtgaggaagactt 75
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 216 atgtagctcagtgactttggagctgtgtgtggttcaacccttggagcgtgaggaagactt 275
Query: 76 tgattgctcaccccctgatctccacctttgagattgcctgtgctgatttcattggtccat 135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 tgattgctcaccccctgatctccacctttgagattgcctgtgctgatttcattggtccat 335
Query: 136 ctgggttcagctgagtgctggtgcaggcaggttttgcagggcataggttcagcccagctc 195
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 336 ctgggttcagctgagtgctggtgcaggcaggttttgcagggcataggctcagcccagctc 395
Query: 196 caggtggcttctggtgtcctggaaccttttcttgtggacacttttgtgaggcttctggct 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 caggtggcttctggtgtcctggaaccttttcttgtggacacttttgtgaggcttctggct 455
Query: 256 ccctgggcagcctggggagatgattttt-----atacctacagtgcagttctcgggtagc 310
||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 456 ccctgggcagcctggggagatga-----gggaaacacctacagtgcagttctcgggtagc 510
Query: 311 cctagacagagagtataccatgggcttgaaagcagagccactgggagtgcctgccctctc 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 cctagacagagagtataccatgggcttgaaagcagagccactgggagtgcctgccctctc 570
Query: 371 aaaagccaagtaccatgggaatggtttgctgagccaactacttacattaggttaaataag 430
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 571 aaaagccaagtaccatgggaacggtttgctgagccaactacttacattaggttaaataag 630
Query: 431 ccagtcctgaactcggctataagatgatgtcattaagagttcagcgaacctccttgcaca 490
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 ccagtcctgaactccgctataagatgatgtcattaagagttcagcgaacctccttgcaca 690
Query: 491 tcagcatcatttaaggcattggagcatctcaggcccaggagtgagagatcctggctggtg 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 tcagcatcatttaaggcattggagcatctcaggcccaggagtgagagatcctggctggtg 750
Query: 551 gtgtctcatagccttttcttggctgcttac 580
||||||||||||||||||||||||||||||
Sbjct: 751 gtgtctcatagccttttcttggctgcttac 780
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 580
Length of database: 980
Length adjustment: 10
Effective length of query: 570
Effective length of database: 970
Effective search space: 552900
Effective search space used: 552900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no146_a07.g1 MSMg01no146_a07.g1 CHROMAT_FILE:
MSMg01no146_a07.g1 PHD_FILE: MSMg01no146_a07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:07:18 2005
(259 letters)
>mm_chr11_79672444_79673108
Length = 665
Score = 385 bits (199), Expect = e-111
Identities = 246/265 (92%), Gaps = 6/265 (2%)
Strand = Plus / Minus
Query: 1 agcttagctgccccctgaggctgagccagagctgcccagtgaggcgggcagtgagagacc 60
|||||||||| | |||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 465 agcttagctgttctctgaggctgagccagagctgcccagtgaggcggggagtgagagacc 406
Query: 61 tctcttgtcccacttcccttccagtgaacaagtcgggaag------ggagctgagggggc 114
||| |||||||| ||| |||||||||||||||| |||||| |||||||||||| |
Sbjct: 405 tcttttgtcccaattctcttccagtgaacaagtggggaagggagctggagctgaggggcc 346
Query: 115 tcccaaagcttcctccatgtgtgggctaaagatgtcgggacagacttggtcagaggccaa 174
|||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 345 tcccaaagcttcctccgtgtgtgggctaaagatgttgggacagacttggtcagaggccaa 286
Query: 175 atttgaacctgaagccaacaggtcctgaggacacatggccaggtcatgcctgggcattgt 234
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 285 atttgaacctgaagccaacaggtcctgagaacacatggccaggtcatgcctgggcattgt 226
Query: 235 ctggaacgcagcctctatcatgcaa 259
||||||| |||||||||||||||||
Sbjct: 225 ctggaacacagcctctatcatgcaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 259
Length of database: 665
Length adjustment: 9
Effective length of query: 250
Effective length of database: 656
Effective search space: 164000
Effective search space used: 164000
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
